Protein–RNA interactions for Protein: Q8NEZ2

VPS37A, Vacuolar protein sorting-associated protein 37A, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37AQ8NEZ2 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VPS37AQ8NEZ2 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VPS37AQ8NEZ2 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
VPS37AQ8NEZ2 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
VPS37AQ8NEZ2 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VPS37AQ8NEZ2 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.27■□□□□ 0.68
VPS37AQ8NEZ2 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
VPS37AQ8NEZ2 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
VPS37AQ8NEZ2 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
VPS37AQ8NEZ2 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.27■□□□□ 0.68
VPS37AQ8NEZ2 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.27■□□□□ 0.68
VPS37AQ8NEZ2 AC091799.1-201ENST00000422823 811 ntBASIC19.27■□□□□ 0.68
VPS37AQ8NEZ2 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
VPS37AQ8NEZ2 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
VPS37AQ8NEZ2 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.27■□□□□ 0.68
VPS37AQ8NEZ2 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
VPS37AQ8NEZ2 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.27■□□□□ 0.68
VPS37AQ8NEZ2 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
VPS37AQ8NEZ2 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
VPS37AQ8NEZ2 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.27■□□□□ 0.68
VPS37AQ8NEZ2 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VPS37AQ8NEZ2 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
VPS37AQ8NEZ2 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
VPS37AQ8NEZ2 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
VPS37AQ8NEZ2 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
VPS37AQ8NEZ2 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
VPS37AQ8NEZ2 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
VPS37AQ8NEZ2 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.26■□□□□ 0.67
VPS37AQ8NEZ2 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VPS37AQ8NEZ2 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VPS37AQ8NEZ2 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.26■□□□□ 0.67
VPS37AQ8NEZ2 AC004854.2-201ENST00000608450 1441 ntBASIC19.26■□□□□ 0.67
VPS37AQ8NEZ2 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.26■□□□□ 0.67
VPS37AQ8NEZ2 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.26■□□□□ 0.67
VPS37AQ8NEZ2 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
VPS37AQ8NEZ2 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
VPS37AQ8NEZ2 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
VPS37AQ8NEZ2 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VPS37AQ8NEZ2 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
VPS37AQ8NEZ2 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
VPS37AQ8NEZ2 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.26■□□□□ 0.67
VPS37AQ8NEZ2 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.26■□□□□ 0.67
VPS37AQ8NEZ2 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.26■□□□□ 0.67
VPS37AQ8NEZ2 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.26■□□□□ 0.67
VPS37AQ8NEZ2 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.26■□□□□ 0.67
VPS37AQ8NEZ2 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
VPS37AQ8NEZ2 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.26■□□□□ 0.67
VPS37AQ8NEZ2 AC112907.3-201ENST00000577781 2400 ntBASIC19.26■□□□□ 0.67
VPS37AQ8NEZ2 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VPS37AQ8NEZ2 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VPS37AQ8NEZ2 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
VPS37AQ8NEZ2 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VPS37AQ8NEZ2 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
VPS37AQ8NEZ2 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VPS37AQ8NEZ2 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VPS37AQ8NEZ2 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VPS37AQ8NEZ2 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VPS37AQ8NEZ2 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
VPS37AQ8NEZ2 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.25■□□□□ 0.67
VPS37AQ8NEZ2 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VPS37AQ8NEZ2 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VPS37AQ8NEZ2 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VPS37AQ8NEZ2 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.25■□□□□ 0.67
VPS37AQ8NEZ2 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.25■□□□□ 0.67
VPS37AQ8NEZ2 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.25■□□□□ 0.67
VPS37AQ8NEZ2 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.25■□□□□ 0.67
VPS37AQ8NEZ2 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VPS37AQ8NEZ2 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.25■□□□□ 0.67
VPS37AQ8NEZ2 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.25■□□□□ 0.67
VPS37AQ8NEZ2 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.25■□□□□ 0.67
VPS37AQ8NEZ2 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VPS37AQ8NEZ2 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VPS37AQ8NEZ2 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VPS37AQ8NEZ2 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.25■□□□□ 0.67
VPS37AQ8NEZ2 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VPS37AQ8NEZ2 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
VPS37AQ8NEZ2 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
VPS37AQ8NEZ2 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VPS37AQ8NEZ2 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
VPS37AQ8NEZ2 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VPS37AQ8NEZ2 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VPS37AQ8NEZ2 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
VPS37AQ8NEZ2 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.24■□□□□ 0.67
VPS37AQ8NEZ2 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.24■□□□□ 0.67
VPS37AQ8NEZ2 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.24■□□□□ 0.67
VPS37AQ8NEZ2 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
VPS37AQ8NEZ2 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
VPS37AQ8NEZ2 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VPS37AQ8NEZ2 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VPS37AQ8NEZ2 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
VPS37AQ8NEZ2 AC019069.1-201ENST00000610008 1333 ntBASIC19.24■□□□□ 0.67
VPS37AQ8NEZ2 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
VPS37AQ8NEZ2 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VPS37AQ8NEZ2 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VPS37AQ8NEZ2 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
VPS37AQ8NEZ2 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.23■□□□□ 0.67
VPS37AQ8NEZ2 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VPS37AQ8NEZ2 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VPS37AQ8NEZ2 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.23■□□□□ 0.67
VPS37AQ8NEZ2 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms