Protein–RNA interactions for Protein: Q8IYK2

CCDC105, Coiled-coil domain-containing protein 105, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC105Q8IYK2 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC105Q8IYK2 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC105Q8IYK2 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.77■■□□□ 1.08
CCDC105Q8IYK2 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
CCDC105Q8IYK2 MIR1224-201ENST00000408193 85 ntBASIC21.77■■□□□ 1.08
CCDC105Q8IYK2 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.77■■□□□ 1.08
CCDC105Q8IYK2 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.77■■□□□ 1.08
CCDC105Q8IYK2 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC105Q8IYK2 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC105Q8IYK2 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC105Q8IYK2 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
CCDC105Q8IYK2 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.07
CCDC105Q8IYK2 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC21.77■■□□□ 1.07
CCDC105Q8IYK2 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.77■■□□□ 1.07
CCDC105Q8IYK2 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.77■■□□□ 1.07
CCDC105Q8IYK2 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CCDC105Q8IYK2 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC105Q8IYK2 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC105Q8IYK2 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.76■■□□□ 1.07
CCDC105Q8IYK2 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC105Q8IYK2 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC105Q8IYK2 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC105Q8IYK2 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC105Q8IYK2 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC105Q8IYK2 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC105Q8IYK2 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC105Q8IYK2 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC105Q8IYK2 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC105Q8IYK2 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC105Q8IYK2 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC105Q8IYK2 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.76■■□□□ 1.07
CCDC105Q8IYK2 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.76■■□□□ 1.07
CCDC105Q8IYK2 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC105Q8IYK2 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC105Q8IYK2 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC105Q8IYK2 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC105Q8IYK2 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC105Q8IYK2 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC105Q8IYK2 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC105Q8IYK2 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.76■■□□□ 1.07
CCDC105Q8IYK2 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC105Q8IYK2 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CCDC105Q8IYK2 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC105Q8IYK2 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.75■■□□□ 1.07
CCDC105Q8IYK2 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC105Q8IYK2 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CCDC105Q8IYK2 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.75■■□□□ 1.07
CCDC105Q8IYK2 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC105Q8IYK2 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
CCDC105Q8IYK2 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.75■■□□□ 1.07
CCDC105Q8IYK2 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC105Q8IYK2 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC105Q8IYK2 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC105Q8IYK2 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.75■■□□□ 1.07
CCDC105Q8IYK2 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC105Q8IYK2 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC105Q8IYK2 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC105Q8IYK2 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC105Q8IYK2 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CCDC105Q8IYK2 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC105Q8IYK2 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.74■■□□□ 1.07
CCDC105Q8IYK2 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.74■■□□□ 1.07
CCDC105Q8IYK2 PLK5-205ENST00000642079 1969 ntBASIC21.74■■□□□ 1.07
CCDC105Q8IYK2 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.74■■□□□ 1.07
CCDC105Q8IYK2 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC105Q8IYK2 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CCDC105Q8IYK2 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC105Q8IYK2 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC105Q8IYK2 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.74■■□□□ 1.07
CCDC105Q8IYK2 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC105Q8IYK2 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC105Q8IYK2 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC105Q8IYK2 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC105Q8IYK2 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC105Q8IYK2 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC105Q8IYK2 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC105Q8IYK2 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.74■■□□□ 1.07
CCDC105Q8IYK2 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC105Q8IYK2 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC105Q8IYK2 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC105Q8IYK2 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC105Q8IYK2 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC105Q8IYK2 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC105Q8IYK2 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.73■■□□□ 1.07
CCDC105Q8IYK2 AC026366.1-201ENST00000488803 879 ntBASIC21.73■■□□□ 1.07
CCDC105Q8IYK2 AC091874.3-201ENST00000512672 1195 ntBASIC21.73■■□□□ 1.07
CCDC105Q8IYK2 EEF1DP3-203ENST00000566025 782 ntBASIC21.73■■□□□ 1.07
CCDC105Q8IYK2 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC105Q8IYK2 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC105Q8IYK2 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC105Q8IYK2 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC105Q8IYK2 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC105Q8IYK2 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC105Q8IYK2 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CCDC105Q8IYK2 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.72■■□□□ 1.07
CCDC105Q8IYK2 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.72■■□□□ 1.07
CCDC105Q8IYK2 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
CCDC105Q8IYK2 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC105Q8IYK2 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CCDC105Q8IYK2 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms