Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
DDX60Q8IY21 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
DDX60Q8IY21 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
DDX60Q8IY21 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
DDX60Q8IY21 TK2-204ENST00000525974 1178 ntTSL 2 BASIC25.23■■□□□ 1.63
DDX60Q8IY21 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC25.23■■□□□ 1.63
DDX60Q8IY21 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
DDX60Q8IY21 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
DDX60Q8IY21 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC25.23■■□□□ 1.63
DDX60Q8IY21 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC25.23■■□□□ 1.63
DDX60Q8IY21 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
DDX60Q8IY21 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC25.23■■□□□ 1.63
DDX60Q8IY21 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
DDX60Q8IY21 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
DDX60Q8IY21 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
DDX60Q8IY21 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC25.22■■□□□ 1.63
DDX60Q8IY21 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
DDX60Q8IY21 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC25.22■■□□□ 1.63
DDX60Q8IY21 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC25.22■■□□□ 1.63
DDX60Q8IY21 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC25.22■■□□□ 1.63
DDX60Q8IY21 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC25.22■■□□□ 1.63
DDX60Q8IY21 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC25.22■■□□□ 1.63
DDX60Q8IY21 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC25.22■■□□□ 1.63
DDX60Q8IY21 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
DDX60Q8IY21 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC25.22■■□□□ 1.63
DDX60Q8IY21 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
DDX60Q8IY21 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC25.22■■□□□ 1.63
DDX60Q8IY21 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
DDX60Q8IY21 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
DDX60Q8IY21 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC25.21■■□□□ 1.63
DDX60Q8IY21 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
DDX60Q8IY21 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
DDX60Q8IY21 TREX2-204ENST00000370212 861 ntTSL 5 BASIC25.21■■□□□ 1.63
DDX60Q8IY21 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
DDX60Q8IY21 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
DDX60Q8IY21 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC25.21■■□□□ 1.63
DDX60Q8IY21 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
DDX60Q8IY21 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC25.21■■□□□ 1.63
DDX60Q8IY21 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
DDX60Q8IY21 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC25.21■■□□□ 1.63
DDX60Q8IY21 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
DDX60Q8IY21 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
DDX60Q8IY21 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC25.21■■□□□ 1.63
DDX60Q8IY21 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC25.21■■□□□ 1.63
DDX60Q8IY21 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC25.21■■□□□ 1.63
DDX60Q8IY21 FBXW4P1-201ENST00000426721 2239 ntBASIC25.21■■□□□ 1.63
DDX60Q8IY21 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
DDX60Q8IY21 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
DDX60Q8IY21 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.63
DDX60Q8IY21 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
DDX60Q8IY21 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC25.2■■□□□ 1.63
DDX60Q8IY21 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
DDX60Q8IY21 GRAP-204ENST00000573099 846 ntTSL 3 BASIC25.2■■□□□ 1.63
DDX60Q8IY21 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.63
DDX60Q8IY21 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
DDX60Q8IY21 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
DDX60Q8IY21 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC25.2■■□□□ 1.63
DDX60Q8IY21 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
DDX60Q8IY21 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.62
DDX60Q8IY21 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
DDX60Q8IY21 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC25.2■■□□□ 1.62
DDX60Q8IY21 AC023632.3-201ENST00000521633 145 ntBASIC25.2■■□□□ 1.62
DDX60Q8IY21 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
DDX60Q8IY21 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC25.2■■□□□ 1.62
DDX60Q8IY21 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC25.2■■□□□ 1.62
DDX60Q8IY21 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
DDX60Q8IY21 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
DDX60Q8IY21 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
DDX60Q8IY21 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
DDX60Q8IY21 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
DDX60Q8IY21 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
DDX60Q8IY21 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
DDX60Q8IY21 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
DDX60Q8IY21 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC25.19■■□□□ 1.62
DDX60Q8IY21 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC25.19■■□□□ 1.62
DDX60Q8IY21 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC25.19■■□□□ 1.62
DDX60Q8IY21 PENK-204ENST00000518770 863 ntTSL 2 BASIC25.19■■□□□ 1.62
DDX60Q8IY21 BX088651.1-201ENST00000540551 451 ntBASIC25.19■■□□□ 1.62
DDX60Q8IY21 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC25.19■■□□□ 1.62
DDX60Q8IY21 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC25.19■■□□□ 1.62
DDX60Q8IY21 RARRES2P10-201ENST00000564312 460 ntBASIC25.19■■□□□ 1.62
DDX60Q8IY21 AL121906.2-201ENST00000621597 723 ntBASIC25.19■■□□□ 1.62
DDX60Q8IY21 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
DDX60Q8IY21 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
DDX60Q8IY21 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
DDX60Q8IY21 AL049796.1-201ENST00000565336 1766 ntBASIC25.19■■□□□ 1.62
DDX60Q8IY21 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
DDX60Q8IY21 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
DDX60Q8IY21 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
DDX60Q8IY21 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
DDX60Q8IY21 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
DDX60Q8IY21 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
DDX60Q8IY21 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
DDX60Q8IY21 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC25.18■■□□□ 1.62
DDX60Q8IY21 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC25.18■■□□□ 1.62
DDX60Q8IY21 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
DDX60Q8IY21 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC25.18■■□□□ 1.62
DDX60Q8IY21 WWC2-AS2-201ENST00000578387 2183 ntBASIC25.18■■□□□ 1.62
DDX60Q8IY21 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
DDX60Q8IY21 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms