Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
SMC5Q8IY18 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
SMC5Q8IY18 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC25.14■■□□□ 1.62
SMC5Q8IY18 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.62
SMC5Q8IY18 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.62
SMC5Q8IY18 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SMC5Q8IY18 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC25.14■■□□□ 1.62
SMC5Q8IY18 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
SMC5Q8IY18 AC125437.2-201ENST00000625180 2167 ntBASIC25.14■■□□□ 1.62
SMC5Q8IY18 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC25.14■■□□□ 1.62
SMC5Q8IY18 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.62
SMC5Q8IY18 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
SMC5Q8IY18 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SMC5Q8IY18 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SMC5Q8IY18 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SMC5Q8IY18 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SMC5Q8IY18 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SMC5Q8IY18 PGM5P4-201ENST00000421970 445 ntBASIC25.14■■□□□ 1.62
SMC5Q8IY18 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC25.14■■□□□ 1.62
SMC5Q8IY18 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC25.14■■□□□ 1.62
SMC5Q8IY18 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
SMC5Q8IY18 RARRES2P4-201ENST00000514074 484 ntBASIC25.14■■□□□ 1.62
SMC5Q8IY18 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SMC5Q8IY18 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC25.14■■□□□ 1.62
SMC5Q8IY18 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SMC5Q8IY18 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.62
SMC5Q8IY18 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC25.14■■□□□ 1.61
SMC5Q8IY18 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
SMC5Q8IY18 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC25.14■■□□□ 1.61
SMC5Q8IY18 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC25.14■■□□□ 1.61
SMC5Q8IY18 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC25.14■■□□□ 1.61
SMC5Q8IY18 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC25.14■■□□□ 1.61
SMC5Q8IY18 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC25.13■■□□□ 1.61
SMC5Q8IY18 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SMC5Q8IY18 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SMC5Q8IY18 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC25.13■■□□□ 1.61
SMC5Q8IY18 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
SMC5Q8IY18 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC25.13■■□□□ 1.61
SMC5Q8IY18 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
SMC5Q8IY18 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC25.13■■□□□ 1.61
SMC5Q8IY18 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC25.13■■□□□ 1.61
SMC5Q8IY18 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC25.13■■□□□ 1.61
SMC5Q8IY18 AL691432.2-201ENST00000607222 2038 ntBASIC25.13■■□□□ 1.61
SMC5Q8IY18 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC25.13■■□□□ 1.61
SMC5Q8IY18 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SMC5Q8IY18 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC25.12■■□□□ 1.61
SMC5Q8IY18 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC25.12■■□□□ 1.61
SMC5Q8IY18 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
SMC5Q8IY18 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC25.12■■□□□ 1.61
SMC5Q8IY18 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SMC5Q8IY18 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
SMC5Q8IY18 GXYLT1P2-201ENST00000433312 1230 ntBASIC25.12■■□□□ 1.61
SMC5Q8IY18 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC25.12■■□□□ 1.61
SMC5Q8IY18 AC100791.3-201ENST00000617619 330 ntBASIC25.12■■□□□ 1.61
SMC5Q8IY18 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SMC5Q8IY18 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SMC5Q8IY18 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC25.12■■□□□ 1.61
SMC5Q8IY18 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SMC5Q8IY18 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SMC5Q8IY18 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
SMC5Q8IY18 PTBP1P-201ENST00000554374 1601 ntBASIC25.12■■□□□ 1.61
SMC5Q8IY18 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SMC5Q8IY18 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SMC5Q8IY18 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SMC5Q8IY18 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC25.11■■□□□ 1.61
SMC5Q8IY18 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
SMC5Q8IY18 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
SMC5Q8IY18 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC25.11■■□□□ 1.61
SMC5Q8IY18 AL162430.1-201ENST00000480705 870 ntBASIC25.11■■□□□ 1.61
SMC5Q8IY18 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC25.11■■□□□ 1.61
SMC5Q8IY18 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
SMC5Q8IY18 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
SMC5Q8IY18 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC25.11■■□□□ 1.61
SMC5Q8IY18 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SMC5Q8IY18 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SMC5Q8IY18 STK25-205ENST00000405883 1904 ntTSL 2 BASIC25.1■■□□□ 1.61
SMC5Q8IY18 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC25.1■■□□□ 1.61
SMC5Q8IY18 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
SMC5Q8IY18 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
SMC5Q8IY18 LBX2-AS1-202ENST00000603175 2083 ntBASIC25.1■■□□□ 1.61
SMC5Q8IY18 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC25.1■■□□□ 1.61
SMC5Q8IY18 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC25.1■■□□□ 1.61
SMC5Q8IY18 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC25.1■■□□□ 1.61
SMC5Q8IY18 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SMC5Q8IY18 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SMC5Q8IY18 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
SMC5Q8IY18 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SMC5Q8IY18 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SMC5Q8IY18 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC25.1■■□□□ 1.61
SMC5Q8IY18 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
SMC5Q8IY18 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SMC5Q8IY18 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SMC5Q8IY18 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
SMC5Q8IY18 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SMC5Q8IY18 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC25.09■■□□□ 1.61
SMC5Q8IY18 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
SMC5Q8IY18 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SMC5Q8IY18 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC25.09■■□□□ 1.61
SMC5Q8IY18 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC25.09■■□□□ 1.61
SMC5Q8IY18 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms