Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RNF135Q8IUD6 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF135Q8IUD6 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF135Q8IUD6 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.48■■□□□ 1.03
RNF135Q8IUD6 PENK-204ENST00000518770 863 ntTSL 2 BASIC21.48■■□□□ 1.03
RNF135Q8IUD6 PRKY-204ENST00000533551 1019 ntBASIC21.48■■□□□ 1.03
RNF135Q8IUD6 AL353708.3-201ENST00000610272 989 ntBASIC21.48■■□□□ 1.03
RNF135Q8IUD6 AC110285.5-201ENST00000611501 352 ntBASIC21.48■■□□□ 1.03
RNF135Q8IUD6 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC21.48■■□□□ 1.03
RNF135Q8IUD6 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC21.48■■□□□ 1.03
RNF135Q8IUD6 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF135Q8IUD6 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.48■■□□□ 1.03
RNF135Q8IUD6 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.48■■□□□ 1.03
RNF135Q8IUD6 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.48■■□□□ 1.03
RNF135Q8IUD6 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF135Q8IUD6 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RNF135Q8IUD6 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.48■■□□□ 1.03
RNF135Q8IUD6 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF135Q8IUD6 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF135Q8IUD6 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.48■■□□□ 1.03
RNF135Q8IUD6 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RNF135Q8IUD6 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.48■■□□□ 1.03
RNF135Q8IUD6 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.48■■□□□ 1.03
RNF135Q8IUD6 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF135Q8IUD6 AL137060.1-201ENST00000618151 2648 ntBASIC21.47■■□□□ 1.03
RNF135Q8IUD6 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNF135Q8IUD6 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
RNF135Q8IUD6 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.47■■□□□ 1.03
RNF135Q8IUD6 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNF135Q8IUD6 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RNF135Q8IUD6 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNF135Q8IUD6 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNF135Q8IUD6 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RNF135Q8IUD6 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.47■■□□□ 1.03
RNF135Q8IUD6 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC21.47■■□□□ 1.03
RNF135Q8IUD6 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.47■■□□□ 1.03
RNF135Q8IUD6 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.47■■□□□ 1.03
RNF135Q8IUD6 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC21.47■■□□□ 1.03
RNF135Q8IUD6 TPM1-226ENST00000560959 925 ntTSL 2 BASIC21.47■■□□□ 1.03
RNF135Q8IUD6 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.47■■□□□ 1.03
RNF135Q8IUD6 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RNF135Q8IUD6 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RNF135Q8IUD6 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RNF135Q8IUD6 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RNF135Q8IUD6 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RNF135Q8IUD6 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF135Q8IUD6 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RNF135Q8IUD6 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RNF135Q8IUD6 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF135Q8IUD6 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF135Q8IUD6 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RNF135Q8IUD6 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.46■■□□□ 1.03
RNF135Q8IUD6 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC21.46■■□□□ 1.03
RNF135Q8IUD6 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RNF135Q8IUD6 RMI2-205ENST00000576027 818 ntTSL 2 BASIC21.46■■□□□ 1.03
RNF135Q8IUD6 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.46■■□□□ 1.03
RNF135Q8IUD6 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.46■■□□□ 1.03
RNF135Q8IUD6 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RNF135Q8IUD6 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF135Q8IUD6 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF135Q8IUD6 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
RNF135Q8IUD6 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF135Q8IUD6 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.46■■□□□ 1.03
RNF135Q8IUD6 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF135Q8IUD6 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.03
RNF135Q8IUD6 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RNF135Q8IUD6 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF135Q8IUD6 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
RNF135Q8IUD6 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF135Q8IUD6 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.45■■□□□ 1.02
RNF135Q8IUD6 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
RNF135Q8IUD6 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF135Q8IUD6 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF135Q8IUD6 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
RNF135Q8IUD6 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RNF135Q8IUD6 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RNF135Q8IUD6 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RNF135Q8IUD6 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
RNF135Q8IUD6 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.45■■□□□ 1.02
RNF135Q8IUD6 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
RNF135Q8IUD6 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.45■■□□□ 1.02
RNF135Q8IUD6 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF135Q8IUD6 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF135Q8IUD6 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RNF135Q8IUD6 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF135Q8IUD6 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF135Q8IUD6 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
RNF135Q8IUD6 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
RNF135Q8IUD6 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
RNF135Q8IUD6 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RNF135Q8IUD6 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
RNF135Q8IUD6 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC21.44■■□□□ 1.02
RNF135Q8IUD6 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
RNF135Q8IUD6 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RNF135Q8IUD6 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF135Q8IUD6 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF135Q8IUD6 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RNF135Q8IUD6 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.44■■□□□ 1.02
RNF135Q8IUD6 AC092865.7-201ENST00000641832 219 ntBASIC21.44■■□□□ 1.02
RNF135Q8IUD6 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms