Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF546Q86UE3 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF546Q86UE3 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
ZNF546Q86UE3 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF546Q86UE3 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF546Q86UE3 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF546Q86UE3 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF546Q86UE3 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
ZNF546Q86UE3 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF546Q86UE3 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF546Q86UE3 TFPT-201ENST00000391757 774 ntTSL 5 BASIC16.83■□□□□ 0.28
ZNF546Q86UE3 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF546Q86UE3 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC16.83■□□□□ 0.28
ZNF546Q86UE3 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF546Q86UE3 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC16.83■□□□□ 0.28
ZNF546Q86UE3 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF546Q86UE3 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
ZNF546Q86UE3 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.83■□□□□ 0.28
ZNF546Q86UE3 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
ZNF546Q86UE3 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF546Q86UE3 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
ZNF546Q86UE3 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
ZNF546Q86UE3 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF546Q86UE3 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
ZNF546Q86UE3 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF546Q86UE3 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.82■□□□□ 0.28
ZNF546Q86UE3 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF546Q86UE3 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF546Q86UE3 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF546Q86UE3 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF546Q86UE3 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF546Q86UE3 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF546Q86UE3 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF546Q86UE3 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ZNF546Q86UE3 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF546Q86UE3 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF546Q86UE3 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC16.82■□□□□ 0.28
ZNF546Q86UE3 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF546Q86UE3 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF546Q86UE3 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.82■□□□□ 0.28
ZNF546Q86UE3 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
ZNF546Q86UE3 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF546Q86UE3 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF546Q86UE3 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ZNF546Q86UE3 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ZNF546Q86UE3 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF546Q86UE3 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.82■□□□□ 0.28
ZNF546Q86UE3 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF546Q86UE3 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ZNF546Q86UE3 AC005332.8-201ENST00000622750 2735 ntBASIC16.82■□□□□ 0.28
ZNF546Q86UE3 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
ZNF546Q86UE3 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF546Q86UE3 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF546Q86UE3 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF546Q86UE3 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF546Q86UE3 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC16.81■□□□□ 0.28
ZNF546Q86UE3 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
ZNF546Q86UE3 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC16.81■□□□□ 0.28
ZNF546Q86UE3 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
ZNF546Q86UE3 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF546Q86UE3 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF546Q86UE3 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF546Q86UE3 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF546Q86UE3 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
ZNF546Q86UE3 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.81■□□□□ 0.28
ZNF546Q86UE3 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF546Q86UE3 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF546Q86UE3 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC16.8■□□□□ 0.28
ZNF546Q86UE3 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
ZNF546Q86UE3 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF546Q86UE3 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF546Q86UE3 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
ZNF546Q86UE3 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.8■□□□□ 0.28
ZNF546Q86UE3 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF546Q86UE3 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
ZNF546Q86UE3 AC087239.1-201ENST00000622671 572 ntBASIC16.8■□□□□ 0.28
ZNF546Q86UE3 EXOG-217ENST00000630638 197 ntTSL 5 BASIC16.8■□□□□ 0.28
ZNF546Q86UE3 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF546Q86UE3 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF546Q86UE3 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF546Q86UE3 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC16.8■□□□□ 0.28
ZNF546Q86UE3 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.8■□□□□ 0.28
ZNF546Q86UE3 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF546Q86UE3 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF546Q86UE3 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
ZNF546Q86UE3 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF546Q86UE3 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF546Q86UE3 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF546Q86UE3 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC16.79■□□□□ 0.28
ZNF546Q86UE3 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC16.79■□□□□ 0.28
ZNF546Q86UE3 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF546Q86UE3 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF546Q86UE3 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF546Q86UE3 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
ZNF546Q86UE3 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF546Q86UE3 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF546Q86UE3 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF546Q86UE3 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF546Q86UE3 RNF146-205ENST00000477776 762 ntTSL 3 BASIC16.79■□□□□ 0.28
ZNF546Q86UE3 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms