Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
PRPF39Q86UA1 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRPF39Q86UA1 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRPF39Q86UA1 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.96■□□□□ 0.95
PRPF39Q86UA1 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
PRPF39Q86UA1 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRPF39Q86UA1 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.95■□□□□ 0.94
PRPF39Q86UA1 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.95■□□□□ 0.94
PRPF39Q86UA1 AC007225.1-201ENST00000566331 1836 ntBASIC20.95■□□□□ 0.94
PRPF39Q86UA1 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRPF39Q86UA1 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
PRPF39Q86UA1 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PRPF39Q86UA1 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRPF39Q86UA1 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.95■□□□□ 0.94
PRPF39Q86UA1 AL512625.2-201ENST00000417533 625 ntBASIC20.95■□□□□ 0.94
PRPF39Q86UA1 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRPF39Q86UA1 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PRPF39Q86UA1 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.95■□□□□ 0.94
PRPF39Q86UA1 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.95■□□□□ 0.94
PRPF39Q86UA1 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
PRPF39Q86UA1 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRPF39Q86UA1 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.94■□□□□ 0.94
PRPF39Q86UA1 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRPF39Q86UA1 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRPF39Q86UA1 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
PRPF39Q86UA1 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PRPF39Q86UA1 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRPF39Q86UA1 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PRPF39Q86UA1 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRPF39Q86UA1 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRPF39Q86UA1 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRPF39Q86UA1 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.94■□□□□ 0.94
PRPF39Q86UA1 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRPF39Q86UA1 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.94■□□□□ 0.94
PRPF39Q86UA1 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PRPF39Q86UA1 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.94■□□□□ 0.94
PRPF39Q86UA1 AL591742.1-201ENST00000604433 565 ntBASIC20.94■□□□□ 0.94
PRPF39Q86UA1 PCDHAC2-203ENST00000615316 3011 ntBASIC20.94■□□□□ 0.94
PRPF39Q86UA1 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PRPF39Q86UA1 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRPF39Q86UA1 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PRPF39Q86UA1 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PRPF39Q86UA1 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
PRPF39Q86UA1 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.94■□□□□ 0.94
PRPF39Q86UA1 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
PRPF39Q86UA1 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRPF39Q86UA1 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.94■□□□□ 0.94
PRPF39Q86UA1 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PRPF39Q86UA1 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PRPF39Q86UA1 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
PRPF39Q86UA1 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
PRPF39Q86UA1 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
PRPF39Q86UA1 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PRPF39Q86UA1 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.93■□□□□ 0.94
PRPF39Q86UA1 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRPF39Q86UA1 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRPF39Q86UA1 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
PRPF39Q86UA1 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRPF39Q86UA1 MIPEPP3-201ENST00000412105 444 ntBASIC20.93■□□□□ 0.94
PRPF39Q86UA1 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.93■□□□□ 0.94
PRPF39Q86UA1 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
PRPF39Q86UA1 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.93■□□□□ 0.94
PRPF39Q86UA1 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.93■□□□□ 0.94
PRPF39Q86UA1 TMEM191A-211ENST00000637163 1067 ntBASIC20.93■□□□□ 0.94
PRPF39Q86UA1 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRPF39Q86UA1 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PRPF39Q86UA1 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
PRPF39Q86UA1 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
PRPF39Q86UA1 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.92■□□□□ 0.94
PRPF39Q86UA1 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRPF39Q86UA1 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
PRPF39Q86UA1 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRPF39Q86UA1 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PRPF39Q86UA1 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
PRPF39Q86UA1 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.92■□□□□ 0.94
PRPF39Q86UA1 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.92■□□□□ 0.94
PRPF39Q86UA1 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PRPF39Q86UA1 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.92■□□□□ 0.94
PRPF39Q86UA1 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.92■□□□□ 0.94
PRPF39Q86UA1 AC016405.3-201ENST00000607710 860 ntBASIC20.92■□□□□ 0.94
PRPF39Q86UA1 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
PRPF39Q86UA1 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRPF39Q86UA1 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.92■□□□□ 0.94
PRPF39Q86UA1 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
PRPF39Q86UA1 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRPF39Q86UA1 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRPF39Q86UA1 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.92■□□□□ 0.94
PRPF39Q86UA1 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.92■□□□□ 0.94
PRPF39Q86UA1 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRPF39Q86UA1 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.91■□□□□ 0.94
PRPF39Q86UA1 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRPF39Q86UA1 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRPF39Q86UA1 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.91■□□□□ 0.94
PRPF39Q86UA1 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.91■□□□□ 0.94
PRPF39Q86UA1 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.91■□□□□ 0.94
PRPF39Q86UA1 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
PRPF39Q86UA1 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.91■□□□□ 0.94
PRPF39Q86UA1 AL162412.1-201ENST00000567129 965 ntBASIC20.91■□□□□ 0.94
PRPF39Q86UA1 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PRPF39Q86UA1 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms