Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC12.61□□□□□ -0.39
VPS13BQ7Z7G8 GUSBP5-202ENST00000510805 1989 ntBASIC12.61□□□□□ -0.39
VPS13BQ7Z7G8 CRYGFP-201ENST00000418459 633 ntBASIC12.61□□□□□ -0.39
VPS13BQ7Z7G8 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VPS13BQ7Z7G8 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
VPS13BQ7Z7G8 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC12.61□□□□□ -0.39
VPS13BQ7Z7G8 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VPS13BQ7Z7G8 KRT8P36-201ENST00000489121 1440 ntBASIC12.61□□□□□ -0.39
VPS13BQ7Z7G8 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VPS13BQ7Z7G8 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
VPS13BQ7Z7G8 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC12.61□□□□□ -0.39
VPS13BQ7Z7G8 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VPS13BQ7Z7G8 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC12.61□□□□□ -0.39
VPS13BQ7Z7G8 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC12.61□□□□□ -0.39
VPS13BQ7Z7G8 NUDT16P1-203ENST00000513809 620 ntBASIC12.61□□□□□ -0.39
VPS13BQ7Z7G8 TOLLIP-AS1-201ENST00000530897 939 ntBASIC12.61□□□□□ -0.39
VPS13BQ7Z7G8 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VPS13BQ7Z7G8 AC133561.1-201ENST00000568600 2415 ntBASIC12.61□□□□□ -0.39
VPS13BQ7Z7G8 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC12.61□□□□□ -0.39
VPS13BQ7Z7G8 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VPS13BQ7Z7G8 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
VPS13BQ7Z7G8 KRT16P5-201ENST00000455284 522 ntBASIC12.6□□□□□ -0.39
VPS13BQ7Z7G8 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC12.6□□□□□ -0.39
VPS13BQ7Z7G8 RPS15-203ENST00000586096 570 ntTSL 2 BASIC12.6□□□□□ -0.39
VPS13BQ7Z7G8 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
VPS13BQ7Z7G8 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC12.6□□□□□ -0.39
VPS13BQ7Z7G8 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VPS13BQ7Z7G8 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VPS13BQ7Z7G8 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VPS13BQ7Z7G8 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC12.6□□□□□ -0.39
VPS13BQ7Z7G8 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VPS13BQ7Z7G8 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC12.6□□□□□ -0.39
VPS13BQ7Z7G8 AC242852.2-201ENST00000615738 1807 ntBASIC12.6□□□□□ -0.39
VPS13BQ7Z7G8 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VPS13BQ7Z7G8 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC12.6□□□□□ -0.39
VPS13BQ7Z7G8 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VPS13BQ7Z7G8 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VPS13BQ7Z7G8 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC12.6□□□□□ -0.39
VPS13BQ7Z7G8 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC12.6□□□□□ -0.39
VPS13BQ7Z7G8 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VPS13BQ7Z7G8 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC12.6□□□□□ -0.39
VPS13BQ7Z7G8 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
VPS13BQ7Z7G8 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VPS13BQ7Z7G8 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
VPS13BQ7Z7G8 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
VPS13BQ7Z7G8 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC12.59□□□□□ -0.39
VPS13BQ7Z7G8 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
VPS13BQ7Z7G8 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VPS13BQ7Z7G8 DECR2-212ENST00000627716 352 ntTSL 2 BASIC12.59□□□□□ -0.39
VPS13BQ7Z7G8 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC12.59□□□□□ -0.39
VPS13BQ7Z7G8 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VPS13BQ7Z7G8 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VPS13BQ7Z7G8 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VPS13BQ7Z7G8 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VPS13BQ7Z7G8 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC12.59□□□□□ -0.39
VPS13BQ7Z7G8 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC12.59□□□□□ -0.39
VPS13BQ7Z7G8 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VPS13BQ7Z7G8 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VPS13BQ7Z7G8 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VPS13BQ7Z7G8 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC12.59□□□□□ -0.39
VPS13BQ7Z7G8 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VPS13BQ7Z7G8 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC12.59□□□□□ -0.39
VPS13BQ7Z7G8 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC12.59□□□□□ -0.39
VPS13BQ7Z7G8 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC12.59□□□□□ -0.39
VPS13BQ7Z7G8 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC12.59□□□□□ -0.39
VPS13BQ7Z7G8 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC12.59□□□□□ -0.39
VPS13BQ7Z7G8 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VPS13BQ7Z7G8 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VPS13BQ7Z7G8 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC12.59□□□□□ -0.39
VPS13BQ7Z7G8 AC073195.1-201ENST00000607241 877 ntBASIC12.59□□□□□ -0.39
VPS13BQ7Z7G8 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
VPS13BQ7Z7G8 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
VPS13BQ7Z7G8 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
VPS13BQ7Z7G8 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC12.58□□□□□ -0.4
VPS13BQ7Z7G8 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC12.58□□□□□ -0.4
VPS13BQ7Z7G8 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC12.58□□□□□ -0.4
VPS13BQ7Z7G8 AP000525.1-201ENST00000608286 694 ntBASIC12.58□□□□□ -0.4
VPS13BQ7Z7G8 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VPS13BQ7Z7G8 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC12.58□□□□□ -0.4
VPS13BQ7Z7G8 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
VPS13BQ7Z7G8 HTR7P1-201ENST00000538670 1336 ntBASIC12.58□□□□□ -0.4
VPS13BQ7Z7G8 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC12.58□□□□□ -0.4
VPS13BQ7Z7G8 UPK3BP1-201ENST00000428678 509 ntBASIC12.58□□□□□ -0.4
VPS13BQ7Z7G8 AC009947.2-201ENST00000444014 672 ntBASIC12.58□□□□□ -0.4
VPS13BQ7Z7G8 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC12.58□□□□□ -0.4
VPS13BQ7Z7G8 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC12.58□□□□□ -0.4
VPS13BQ7Z7G8 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC12.58□□□□□ -0.4
VPS13BQ7Z7G8 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VPS13BQ7Z7G8 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC12.58□□□□□ -0.4
VPS13BQ7Z7G8 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VPS13BQ7Z7G8 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
VPS13BQ7Z7G8 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
VPS13BQ7Z7G8 PRR31-201ENST00000371629 978 ntTSL 2 BASIC12.58□□□□□ -0.4
VPS13BQ7Z7G8 FAM197Y1-201ENST00000421178 764 ntBASIC12.58□□□□□ -0.4
VPS13BQ7Z7G8 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC12.58□□□□□ -0.4
VPS13BQ7Z7G8 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC12.57□□□□□ -0.4
VPS13BQ7Z7G8 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VPS13BQ7Z7G8 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
VPS13BQ7Z7G8 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VPS13BQ7Z7G8 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms