Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF44Q7L0R7 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.42■□□□□ 0.7
RNF44Q7L0R7 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.42■□□□□ 0.7
RNF44Q7L0R7 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF44Q7L0R7 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.42■□□□□ 0.7
RNF44Q7L0R7 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF44Q7L0R7 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
RNF44Q7L0R7 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RNF44Q7L0R7 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RNF44Q7L0R7 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RNF44Q7L0R7 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RNF44Q7L0R7 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.42■□□□□ 0.7
RNF44Q7L0R7 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RNF44Q7L0R7 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RNF44Q7L0R7 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF44Q7L0R7 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF44Q7L0R7 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF44Q7L0R7 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF44Q7L0R7 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF44Q7L0R7 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF44Q7L0R7 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RNF44Q7L0R7 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF44Q7L0R7 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF44Q7L0R7 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF44Q7L0R7 AL137060.1-201ENST00000618151 2648 ntBASIC19.41■□□□□ 0.7
RNF44Q7L0R7 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF44Q7L0R7 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.41■□□□□ 0.7
RNF44Q7L0R7 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF44Q7L0R7 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF44Q7L0R7 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF44Q7L0R7 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF44Q7L0R7 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF44Q7L0R7 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.41■□□□□ 0.7
RNF44Q7L0R7 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.41■□□□□ 0.7
RNF44Q7L0R7 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF44Q7L0R7 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF44Q7L0R7 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
RNF44Q7L0R7 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.41■□□□□ 0.7
RNF44Q7L0R7 AC007225.1-201ENST00000566331 1836 ntBASIC19.41■□□□□ 0.7
RNF44Q7L0R7 FP700111.2-201ENST00000619190 1892 ntBASIC19.41■□□□□ 0.7
RNF44Q7L0R7 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF44Q7L0R7 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF44Q7L0R7 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF44Q7L0R7 AL121603.2-201ENST00000557373 2117 ntBASIC19.4■□□□□ 0.7
RNF44Q7L0R7 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RNF44Q7L0R7 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.4■□□□□ 0.7
RNF44Q7L0R7 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
RNF44Q7L0R7 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF44Q7L0R7 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF44Q7L0R7 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.4■□□□□ 0.7
RNF44Q7L0R7 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RNF44Q7L0R7 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF44Q7L0R7 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF44Q7L0R7 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
RNF44Q7L0R7 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RNF44Q7L0R7 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.4■□□□□ 0.7
RNF44Q7L0R7 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
RNF44Q7L0R7 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.4■□□□□ 0.7
RNF44Q7L0R7 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RNF44Q7L0R7 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF44Q7L0R7 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF44Q7L0R7 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF44Q7L0R7 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
RNF44Q7L0R7 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
RNF44Q7L0R7 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
RNF44Q7L0R7 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
RNF44Q7L0R7 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
RNF44Q7L0R7 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
RNF44Q7L0R7 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
RNF44Q7L0R7 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
RNF44Q7L0R7 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF44Q7L0R7 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.39■□□□□ 0.69
RNF44Q7L0R7 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF44Q7L0R7 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF44Q7L0R7 CD99P1-205ENST00000527459 561 ntBASIC19.39■□□□□ 0.69
RNF44Q7L0R7 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.39■□□□□ 0.69
RNF44Q7L0R7 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF44Q7L0R7 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.39■□□□□ 0.69
RNF44Q7L0R7 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
RNF44Q7L0R7 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.39■□□□□ 0.69
RNF44Q7L0R7 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF44Q7L0R7 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF44Q7L0R7 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF44Q7L0R7 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.39■□□□□ 0.69
RNF44Q7L0R7 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF44Q7L0R7 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.38■□□□□ 0.69
RNF44Q7L0R7 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF44Q7L0R7 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.38■□□□□ 0.69
RNF44Q7L0R7 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RNF44Q7L0R7 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.38■□□□□ 0.69
RNF44Q7L0R7 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF44Q7L0R7 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.38■□□□□ 0.69
RNF44Q7L0R7 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF44Q7L0R7 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.38■□□□□ 0.69
RNF44Q7L0R7 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.38■□□□□ 0.69
RNF44Q7L0R7 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF44Q7L0R7 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.38■□□□□ 0.69
RNF44Q7L0R7 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.38■□□□□ 0.69
RNF44Q7L0R7 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.38■□□□□ 0.69
RNF44Q7L0R7 HLA-B-256ENST00000639848 1089 ntBASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms