Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDHR3Q6ZTQ4 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDHR3Q6ZTQ4 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.84
CDHR3Q6ZTQ4 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CDHR3Q6ZTQ4 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDHR3Q6ZTQ4 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.33■□□□□ 0.84
CDHR3Q6ZTQ4 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDHR3Q6ZTQ4 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.33■□□□□ 0.84
CDHR3Q6ZTQ4 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.33■□□□□ 0.84
CDHR3Q6ZTQ4 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDHR3Q6ZTQ4 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.33■□□□□ 0.84
CDHR3Q6ZTQ4 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDHR3Q6ZTQ4 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.32■□□□□ 0.84
CDHR3Q6ZTQ4 SMG8-203ENST00000578922 2178 ntBASIC20.32■□□□□ 0.84
CDHR3Q6ZTQ4 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDHR3Q6ZTQ4 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDHR3Q6ZTQ4 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDHR3Q6ZTQ4 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDHR3Q6ZTQ4 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDHR3Q6ZTQ4 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CDHR3Q6ZTQ4 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.32■□□□□ 0.84
CDHR3Q6ZTQ4 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.32■□□□□ 0.84
CDHR3Q6ZTQ4 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.32■□□□□ 0.84
CDHR3Q6ZTQ4 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDHR3Q6ZTQ4 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDHR3Q6ZTQ4 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.32■□□□□ 0.84
CDHR3Q6ZTQ4 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.32■□□□□ 0.84
CDHR3Q6ZTQ4 AC011767.1-201ENST00000617410 1153 ntBASIC20.32■□□□□ 0.84
CDHR3Q6ZTQ4 AC073111.5-205ENST00000641717 521 ntBASIC20.32■□□□□ 0.84
CDHR3Q6ZTQ4 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CDHR3Q6ZTQ4 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDHR3Q6ZTQ4 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDHR3Q6ZTQ4 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDHR3Q6ZTQ4 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
CDHR3Q6ZTQ4 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.32■□□□□ 0.84
CDHR3Q6ZTQ4 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.32■□□□□ 0.84
CDHR3Q6ZTQ4 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDHR3Q6ZTQ4 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDHR3Q6ZTQ4 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CDHR3Q6ZTQ4 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDHR3Q6ZTQ4 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDHR3Q6ZTQ4 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDHR3Q6ZTQ4 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDHR3Q6ZTQ4 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDHR3Q6ZTQ4 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CDHR3Q6ZTQ4 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.31■□□□□ 0.84
CDHR3Q6ZTQ4 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDHR3Q6ZTQ4 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.31■□□□□ 0.84
CDHR3Q6ZTQ4 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDHR3Q6ZTQ4 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDHR3Q6ZTQ4 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.31■□□□□ 0.84
CDHR3Q6ZTQ4 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDHR3Q6ZTQ4 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDHR3Q6ZTQ4 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.31■□□□□ 0.84
CDHR3Q6ZTQ4 CDCA4P2-201ENST00000441182 718 ntBASIC20.31■□□□□ 0.84
CDHR3Q6ZTQ4 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDHR3Q6ZTQ4 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.31■□□□□ 0.84
CDHR3Q6ZTQ4 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.31■□□□□ 0.84
CDHR3Q6ZTQ4 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.31■□□□□ 0.84
CDHR3Q6ZTQ4 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CDHR3Q6ZTQ4 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CDHR3Q6ZTQ4 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDHR3Q6ZTQ4 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDHR3Q6ZTQ4 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDHR3Q6ZTQ4 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
CDHR3Q6ZTQ4 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.3■□□□□ 0.84
CDHR3Q6ZTQ4 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CDHR3Q6ZTQ4 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CDHR3Q6ZTQ4 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.3■□□□□ 0.84
CDHR3Q6ZTQ4 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDHR3Q6ZTQ4 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.3■□□□□ 0.84
CDHR3Q6ZTQ4 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.3■□□□□ 0.84
CDHR3Q6ZTQ4 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.3■□□□□ 0.84
CDHR3Q6ZTQ4 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.3■□□□□ 0.84
CDHR3Q6ZTQ4 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.3■□□□□ 0.84
CDHR3Q6ZTQ4 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDHR3Q6ZTQ4 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDHR3Q6ZTQ4 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDHR3Q6ZTQ4 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDHR3Q6ZTQ4 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDHR3Q6ZTQ4 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDHR3Q6ZTQ4 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDHR3Q6ZTQ4 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDHR3Q6ZTQ4 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.3■□□□□ 0.84
CDHR3Q6ZTQ4 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDHR3Q6ZTQ4 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.29■□□□□ 0.84
CDHR3Q6ZTQ4 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.29■□□□□ 0.84
CDHR3Q6ZTQ4 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CDHR3Q6ZTQ4 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDHR3Q6ZTQ4 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDHR3Q6ZTQ4 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.29■□□□□ 0.84
CDHR3Q6ZTQ4 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.29■□□□□ 0.84
CDHR3Q6ZTQ4 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.29■□□□□ 0.84
CDHR3Q6ZTQ4 MFSD11-216ENST00000590393 1141 ntBASIC20.29■□□□□ 0.84
CDHR3Q6ZTQ4 RAP2CP1-201ENST00000605103 478 ntBASIC20.29■□□□□ 0.84
CDHR3Q6ZTQ4 AL158211.5-201ENST00000623583 2518 ntBASIC20.29■□□□□ 0.84
CDHR3Q6ZTQ4 AC116562.4-201ENST00000641316 2276 ntBASIC20.29■□□□□ 0.84
CDHR3Q6ZTQ4 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDHR3Q6ZTQ4 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDHR3Q6ZTQ4 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms