Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
FOXR1Q6PIV2 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC21.05■□□□□ 0.96
FOXR1Q6PIV2 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FOXR1Q6PIV2 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FOXR1Q6PIV2 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FOXR1Q6PIV2 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FOXR1Q6PIV2 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
FOXR1Q6PIV2 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
FOXR1Q6PIV2 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FOXR1Q6PIV2 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
FOXR1Q6PIV2 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.04■□□□□ 0.96
FOXR1Q6PIV2 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.04■□□□□ 0.96
FOXR1Q6PIV2 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.04■□□□□ 0.96
FOXR1Q6PIV2 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
FOXR1Q6PIV2 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
FOXR1Q6PIV2 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC21.04■□□□□ 0.96
FOXR1Q6PIV2 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.04■□□□□ 0.96
FOXR1Q6PIV2 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
FOXR1Q6PIV2 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
FOXR1Q6PIV2 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
FOXR1Q6PIV2 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
FOXR1Q6PIV2 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
FOXR1Q6PIV2 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC21.03■□□□□ 0.96
FOXR1Q6PIV2 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.03■□□□□ 0.96
FOXR1Q6PIV2 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.03■□□□□ 0.96
FOXR1Q6PIV2 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.03■□□□□ 0.96
FOXR1Q6PIV2 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.03■□□□□ 0.96
FOXR1Q6PIV2 AC073111.5-205ENST00000641717 521 ntBASIC21.03■□□□□ 0.96
FOXR1Q6PIV2 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
FOXR1Q6PIV2 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
FOXR1Q6PIV2 AC004687.1-201ENST00000579003 1625 ntBASIC21.03■□□□□ 0.96
FOXR1Q6PIV2 WAC-202ENST00000347934 2839 ntTSL 5 BASIC21.03■□□□□ 0.96
FOXR1Q6PIV2 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
FOXR1Q6PIV2 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.02■□□□□ 0.96
FOXR1Q6PIV2 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.02■□□□□ 0.96
FOXR1Q6PIV2 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
FOXR1Q6PIV2 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC21.02■□□□□ 0.96
FOXR1Q6PIV2 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
FOXR1Q6PIV2 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC21.02■□□□□ 0.96
FOXR1Q6PIV2 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.02■□□□□ 0.96
FOXR1Q6PIV2 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
FOXR1Q6PIV2 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
FOXR1Q6PIV2 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
FOXR1Q6PIV2 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
FOXR1Q6PIV2 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
FOXR1Q6PIV2 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
FOXR1Q6PIV2 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
FOXR1Q6PIV2 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
FOXR1Q6PIV2 AC006015.1-201ENST00000429970 570 ntBASIC21.02■□□□□ 0.96
FOXR1Q6PIV2 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.02■□□□□ 0.96
FOXR1Q6PIV2 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.02■□□□□ 0.96
FOXR1Q6PIV2 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
FOXR1Q6PIV2 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
FOXR1Q6PIV2 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
FOXR1Q6PIV2 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.02■□□□□ 0.96
FOXR1Q6PIV2 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
FOXR1Q6PIV2 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
FOXR1Q6PIV2 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
FOXR1Q6PIV2 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC21.02■□□□□ 0.96
FOXR1Q6PIV2 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
FOXR1Q6PIV2 AC004854.2-201ENST00000608450 1441 ntBASIC21.02■□□□□ 0.96
FOXR1Q6PIV2 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.02■□□□□ 0.96
FOXR1Q6PIV2 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
FOXR1Q6PIV2 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
FOXR1Q6PIV2 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.02■□□□□ 0.95
FOXR1Q6PIV2 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
FOXR1Q6PIV2 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
FOXR1Q6PIV2 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FOXR1Q6PIV2 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FOXR1Q6PIV2 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
FOXR1Q6PIV2 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
FOXR1Q6PIV2 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FOXR1Q6PIV2 CDCA4P2-201ENST00000441182 718 ntBASIC21.01■□□□□ 0.95
FOXR1Q6PIV2 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.01■□□□□ 0.95
FOXR1Q6PIV2 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.01■□□□□ 0.95
FOXR1Q6PIV2 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.01■□□□□ 0.95
FOXR1Q6PIV2 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.01■□□□□ 0.95
FOXR1Q6PIV2 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.01■□□□□ 0.95
FOXR1Q6PIV2 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FOXR1Q6PIV2 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
FOXR1Q6PIV2 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FOXR1Q6PIV2 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
FOXR1Q6PIV2 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.01■□□□□ 0.95
FOXR1Q6PIV2 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
FOXR1Q6PIV2 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FOXR1Q6PIV2 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.01■□□□□ 0.95
FOXR1Q6PIV2 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FOXR1Q6PIV2 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FOXR1Q6PIV2 AL158211.5-201ENST00000623583 2518 ntBASIC21.01■□□□□ 0.95
FOXR1Q6PIV2 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
FOXR1Q6PIV2 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
FOXR1Q6PIV2 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC21■□□□□ 0.95
FOXR1Q6PIV2 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21■□□□□ 0.95
FOXR1Q6PIV2 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
FOXR1Q6PIV2 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
FOXR1Q6PIV2 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
FOXR1Q6PIV2 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21■□□□□ 0.95
FOXR1Q6PIV2 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21■□□□□ 0.95
FOXR1Q6PIV2 BID-214ENST00000617586 542 ntTSL 5 BASIC21■□□□□ 0.95
FOXR1Q6PIV2 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms