Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 KRT18P48-201ENST00000434763 852 ntBASIC21.06■□□□□ 0.96
PTCRAQ6ISU1 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PTCRAQ6ISU1 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PTCRAQ6ISU1 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PTCRAQ6ISU1 C2orf69P3-201ENST00000565542 1120 ntBASIC21.06■□□□□ 0.96
PTCRAQ6ISU1 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.06■□□□□ 0.96
PTCRAQ6ISU1 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PTCRAQ6ISU1 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PTCRAQ6ISU1 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PTCRAQ6ISU1 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTCRAQ6ISU1 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
PTCRAQ6ISU1 KRT16P1-201ENST00000399124 1418 ntBASIC21.05■□□□□ 0.96
PTCRAQ6ISU1 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC21.05■□□□□ 0.96
PTCRAQ6ISU1 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTCRAQ6ISU1 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PTCRAQ6ISU1 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC21.05■□□□□ 0.96
PTCRAQ6ISU1 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.05■□□□□ 0.96
PTCRAQ6ISU1 AC026396.1-201ENST00000419388 421 ntBASIC21.05■□□□□ 0.96
PTCRAQ6ISU1 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTCRAQ6ISU1 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC21.05■□□□□ 0.96
PTCRAQ6ISU1 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTCRAQ6ISU1 AC063952.2-201ENST00000498792 1227 ntBASIC21.05■□□□□ 0.96
PTCRAQ6ISU1 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC21.05■□□□□ 0.96
PTCRAQ6ISU1 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
PTCRAQ6ISU1 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC21.05■□□□□ 0.96
PTCRAQ6ISU1 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTCRAQ6ISU1 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTCRAQ6ISU1 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.05■□□□□ 0.96
PTCRAQ6ISU1 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTCRAQ6ISU1 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PTCRAQ6ISU1 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTCRAQ6ISU1 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTCRAQ6ISU1 NIFKP9-201ENST00000419265 221 ntBASIC21.04■□□□□ 0.96
PTCRAQ6ISU1 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.04■□□□□ 0.96
PTCRAQ6ISU1 ECEL1P2-202ENST00000465689 757 ntBASIC21.04■□□□□ 0.96
PTCRAQ6ISU1 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC21.04■□□□□ 0.96
PTCRAQ6ISU1 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.04■□□□□ 0.96
PTCRAQ6ISU1 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
PTCRAQ6ISU1 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTCRAQ6ISU1 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PTCRAQ6ISU1 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
PTCRAQ6ISU1 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
PTCRAQ6ISU1 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PTCRAQ6ISU1 BX664615.1-201ENST00000443558 458 ntBASIC21.03■□□□□ 0.96
PTCRAQ6ISU1 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PTCRAQ6ISU1 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
PTCRAQ6ISU1 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.03■□□□□ 0.96
PTCRAQ6ISU1 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PTCRAQ6ISU1 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PTCRAQ6ISU1 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PTCRAQ6ISU1 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PTCRAQ6ISU1 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PTCRAQ6ISU1 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PTCRAQ6ISU1 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
PTCRAQ6ISU1 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PTCRAQ6ISU1 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PTCRAQ6ISU1 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PTCRAQ6ISU1 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
PTCRAQ6ISU1 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PTCRAQ6ISU1 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC21.02■□□□□ 0.96
PTCRAQ6ISU1 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC21.02■□□□□ 0.96
PTCRAQ6ISU1 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.02■□□□□ 0.96
PTCRAQ6ISU1 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC21.02■□□□□ 0.96
PTCRAQ6ISU1 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.02■□□□□ 0.96
PTCRAQ6ISU1 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PTCRAQ6ISU1 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
PTCRAQ6ISU1 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PTCRAQ6ISU1 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
PTCRAQ6ISU1 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
PTCRAQ6ISU1 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
PTCRAQ6ISU1 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PTCRAQ6ISU1 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PTCRAQ6ISU1 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PTCRAQ6ISU1 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.01■□□□□ 0.95
PTCRAQ6ISU1 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.01■□□□□ 0.95
PTCRAQ6ISU1 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PTCRAQ6ISU1 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
PTCRAQ6ISU1 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PTCRAQ6ISU1 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PTCRAQ6ISU1 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
PTCRAQ6ISU1 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PTCRAQ6ISU1 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PTCRAQ6ISU1 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC21.01■□□□□ 0.95
PTCRAQ6ISU1 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC21.01■□□□□ 0.95
PTCRAQ6ISU1 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.01■□□□□ 0.95
PTCRAQ6ISU1 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC21.01■□□□□ 0.95
PTCRAQ6ISU1 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC21.01■□□□□ 0.95
PTCRAQ6ISU1 EGLN1P1-201ENST00000531623 762 ntBASIC21.01■□□□□ 0.95
PTCRAQ6ISU1 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC21.01■□□□□ 0.95
PTCRAQ6ISU1 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC21.01■□□□□ 0.95
PTCRAQ6ISU1 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.01■□□□□ 0.95
PTCRAQ6ISU1 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
PTCRAQ6ISU1 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21■□□□□ 0.95
PTCRAQ6ISU1 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
PTCRAQ6ISU1 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
PTCRAQ6ISU1 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
PTCRAQ6ISU1 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PTCRAQ6ISU1 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
PTCRAQ6ISU1 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC21■□□□□ 0.95
PTCRAQ6ISU1 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms