Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
RNF213Q63HN8 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RNF213Q63HN8 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
RNF213Q63HN8 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
RNF213Q63HN8 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
RNF213Q63HN8 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC10.94□□□□□ -0.66
RNF213Q63HN8 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC10.94□□□□□ -0.66
RNF213Q63HN8 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC10.94□□□□□ -0.66
RNF213Q63HN8 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
RNF213Q63HN8 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC10.94□□□□□ -0.66
RNF213Q63HN8 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC10.94□□□□□ -0.66
RNF213Q63HN8 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RNF213Q63HN8 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
RNF213Q63HN8 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
RNF213Q63HN8 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RNF213Q63HN8 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RNF213Q63HN8 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC10.94□□□□□ -0.66
RNF213Q63HN8 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
RNF213Q63HN8 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC10.94□□□□□ -0.66
RNF213Q63HN8 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
RNF213Q63HN8 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC10.93□□□□□ -0.66
RNF213Q63HN8 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC10.93□□□□□ -0.66
RNF213Q63HN8 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC10.93□□□□□ -0.66
RNF213Q63HN8 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
RNF213Q63HN8 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC10.93□□□□□ -0.66
RNF213Q63HN8 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
RNF213Q63HN8 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC10.93□□□□□ -0.66
RNF213Q63HN8 AC022211.4-201ENST00000625094 2161 ntBASIC10.93□□□□□ -0.66
RNF213Q63HN8 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
RNF213Q63HN8 HMGA1P5-201ENST00000412453 271 ntBASIC10.93□□□□□ -0.66
RNF213Q63HN8 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
RNF213Q63HN8 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
RNF213Q63HN8 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC10.93□□□□□ -0.66
RNF213Q63HN8 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RNF213Q63HN8 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
RNF213Q63HN8 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
RNF213Q63HN8 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RNF213Q63HN8 HYMAI.1-201ENST00000620949 238 ntBASIC10.93□□□□□ -0.66
RNF213Q63HN8 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
RNF213Q63HN8 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
RNF213Q63HN8 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC10.93□□□□□ -0.66
RNF213Q63HN8 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
RNF213Q63HN8 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC10.93□□□□□ -0.66
RNF213Q63HN8 AC026271.3-201ENST00000571884 352 ntBASIC10.93□□□□□ -0.66
RNF213Q63HN8 CR392000.1-201ENST00000624770 1228 ntBASIC10.93□□□□□ -0.66
RNF213Q63HN8 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RNF213Q63HN8 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
RNF213Q63HN8 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RNF213Q63HN8 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC10.92□□□□□ -0.66
RNF213Q63HN8 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
RNF213Q63HN8 AC079089.2-201ENST00000531211 1277 ntBASIC10.92□□□□□ -0.66
RNF213Q63HN8 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
RNF213Q63HN8 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC10.92□□□□□ -0.66
RNF213Q63HN8 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RNF213Q63HN8 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
RNF213Q63HN8 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC10.92□□□□□ -0.66
RNF213Q63HN8 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
RNF213Q63HN8 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
RNF213Q63HN8 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
RNF213Q63HN8 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC10.92□□□□□ -0.66
RNF213Q63HN8 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RNF213Q63HN8 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RNF213Q63HN8 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC10.92□□□□□ -0.66
RNF213Q63HN8 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC10.92□□□□□ -0.66
RNF213Q63HN8 SLC25A1P1-201ENST00000528351 927 ntBASIC10.92□□□□□ -0.66
RNF213Q63HN8 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC10.92□□□□□ -0.66
RNF213Q63HN8 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
RNF213Q63HN8 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC10.92□□□□□ -0.66
RNF213Q63HN8 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC10.92□□□□□ -0.66
RNF213Q63HN8 BX640515.1-201ENST00000617215 977 ntBASIC10.92□□□□□ -0.66
RNF213Q63HN8 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC10.92□□□□□ -0.66
RNF213Q63HN8 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
RNF213Q63HN8 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RNF213Q63HN8 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
RNF213Q63HN8 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
RNF213Q63HN8 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
RNF213Q63HN8 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RNF213Q63HN8 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
RNF213Q63HN8 AL445675.2-201ENST00000620291 557 ntBASIC10.92□□□□□ -0.66
RNF213Q63HN8 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
RNF213Q63HN8 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC10.91□□□□□ -0.66
RNF213Q63HN8 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
RNF213Q63HN8 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC10.91□□□□□ -0.66
RNF213Q63HN8 AC091799.1-201ENST00000422823 811 ntBASIC10.91□□□□□ -0.66
RNF213Q63HN8 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC10.91□□□□□ -0.66
RNF213Q63HN8 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RNF213Q63HN8 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RNF213Q63HN8 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC10.91□□□□□ -0.66
RNF213Q63HN8 AL031008.1-201ENST00000619963 541 ntBASIC10.91□□□□□ -0.66
RNF213Q63HN8 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RNF213Q63HN8 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RNF213Q63HN8 LINC00526-201ENST00000581067 1875 ntBASIC10.91□□□□□ -0.66
RNF213Q63HN8 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RNF213Q63HN8 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RNF213Q63HN8 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC10.91□□□□□ -0.66
RNF213Q63HN8 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC10.91□□□□□ -0.66
RNF213Q63HN8 MCRIP2P1-201ENST00000394346 511 ntBASIC10.91□□□□□ -0.66
RNF213Q63HN8 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RNF213Q63HN8 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RNF213Q63HN8 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms