Protein–RNA interactions for Protein: Q5VXU3

CHIC1, Cysteine-rich hydrophobic domain-containing protein 1, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHIC1Q5VXU3 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC34.72■■■■□ 3.15
CHIC1Q5VXU3 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC34.72■■■■□ 3.15
CHIC1Q5VXU3 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC34.71■■■■□ 3.15
CHIC1Q5VXU3 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
CHIC1Q5VXU3 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
CHIC1Q5VXU3 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC34.71■■■■□ 3.15
CHIC1Q5VXU3 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC34.71■■■■□ 3.15
CHIC1Q5VXU3 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC34.71■■■■□ 3.15
CHIC1Q5VXU3 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC34.71■■■■□ 3.15
CHIC1Q5VXU3 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC34.71■■■■□ 3.15
CHIC1Q5VXU3 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
CHIC1Q5VXU3 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
CHIC1Q5VXU3 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
CHIC1Q5VXU3 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC34.71■■■■□ 3.15
CHIC1Q5VXU3 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC34.71■■■■□ 3.15
CHIC1Q5VXU3 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.15
CHIC1Q5VXU3 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.15
CHIC1Q5VXU3 AL390039.1-201ENST00000399148 611 ntBASIC34.7■■■■□ 3.15
CHIC1Q5VXU3 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC34.7■■■■□ 3.15
CHIC1Q5VXU3 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC34.7■■■■□ 3.15
CHIC1Q5VXU3 PBX1-209ENST00000485769 834 ntTSL 2 BASIC34.7■■■■□ 3.15
CHIC1Q5VXU3 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC34.7■■■■□ 3.15
CHIC1Q5VXU3 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC34.7■■■■□ 3.15
CHIC1Q5VXU3 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC34.7■■■■□ 3.15
CHIC1Q5VXU3 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC34.7■■■■□ 3.15
CHIC1Q5VXU3 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC34.7■■■■□ 3.15
CHIC1Q5VXU3 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC34.7■■■■□ 3.15
CHIC1Q5VXU3 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC34.7■■■■□ 3.15
CHIC1Q5VXU3 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC34.7■■■■□ 3.14
CHIC1Q5VXU3 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
CHIC1Q5VXU3 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC34.69■■■■□ 3.14
CHIC1Q5VXU3 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
CHIC1Q5VXU3 AC068205.1-201ENST00000526615 689 ntTSL 3 BASIC34.69■■■■□ 3.14
CHIC1Q5VXU3 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC34.69■■■■□ 3.14
CHIC1Q5VXU3 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC34.69■■■■□ 3.14
CHIC1Q5VXU3 MARS-234ENST00000630571 216 ntTSL 5 BASIC34.69■■■■□ 3.14
CHIC1Q5VXU3 MARS-235ENST00000630803 183 ntTSL 3 BASIC34.69■■■■□ 3.14
CHIC1Q5VXU3 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC34.69■■■■□ 3.14
CHIC1Q5VXU3 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC34.69■■■■□ 3.14
CHIC1Q5VXU3 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
CHIC1Q5VXU3 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC34.69■■■■□ 3.14
CHIC1Q5VXU3 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC34.69■■■■□ 3.14
CHIC1Q5VXU3 LINC01006-201ENST00000333319 2292 ntBASIC34.69■■■■□ 3.14
CHIC1Q5VXU3 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
CHIC1Q5VXU3 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
CHIC1Q5VXU3 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
CHIC1Q5VXU3 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC34.68■■■■□ 3.14
CHIC1Q5VXU3 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
CHIC1Q5VXU3 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC34.68■■■■□ 3.14
CHIC1Q5VXU3 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC34.68■■■■□ 3.14
CHIC1Q5VXU3 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC34.68■■■■□ 3.14
CHIC1Q5VXU3 AC013470.3-201ENST00000420252 1194 ntBASIC34.68■■■■□ 3.14
CHIC1Q5VXU3 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC34.68■■■■□ 3.14
CHIC1Q5VXU3 ACTR6P1-201ENST00000514311 1104 ntBASIC34.68■■■■□ 3.14
CHIC1Q5VXU3 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC34.68■■■■□ 3.14
CHIC1Q5VXU3 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC34.68■■■■□ 3.14
CHIC1Q5VXU3 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC34.68■■■■□ 3.14
CHIC1Q5VXU3 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC34.67■■■■□ 3.14
CHIC1Q5VXU3 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC34.67■■■■□ 3.14
CHIC1Q5VXU3 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC34.67■■■■□ 3.14
CHIC1Q5VXU3 KRT8P36-201ENST00000489121 1440 ntBASIC34.67■■■■□ 3.14
CHIC1Q5VXU3 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC34.67■■■■□ 3.14
CHIC1Q5VXU3 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC34.67■■■■□ 3.14
CHIC1Q5VXU3 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC34.67■■■■□ 3.14
CHIC1Q5VXU3 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC34.67■■■■□ 3.14
CHIC1Q5VXU3 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC34.67■■■■□ 3.14
CHIC1Q5VXU3 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
CHIC1Q5VXU3 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC34.67■■■■□ 3.14
CHIC1Q5VXU3 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC34.67■■■■□ 3.14
CHIC1Q5VXU3 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC34.67■■■■□ 3.14
CHIC1Q5VXU3 RPAP2P1-201ENST00000603626 1168 ntBASIC34.67■■■■□ 3.14
CHIC1Q5VXU3 AC097478.2-201ENST00000610572 514 ntBASIC34.67■■■■□ 3.14
CHIC1Q5VXU3 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC34.67■■■■□ 3.14
CHIC1Q5VXU3 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC34.67■■■■□ 3.14
CHIC1Q5VXU3 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC34.67■■■■□ 3.14
CHIC1Q5VXU3 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
CHIC1Q5VXU3 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC34.66■■■■□ 3.14
CHIC1Q5VXU3 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC34.66■■■■□ 3.14
CHIC1Q5VXU3 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC34.66■■■■□ 3.14
CHIC1Q5VXU3 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC34.66■■■■□ 3.14
CHIC1Q5VXU3 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
CHIC1Q5VXU3 RPS20P25-201ENST00000412447 352 ntBASIC34.66■■■■□ 3.14
CHIC1Q5VXU3 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC34.66■■■■□ 3.14
CHIC1Q5VXU3 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC34.66■■■■□ 3.14
CHIC1Q5VXU3 AC133552.2-202ENST00000575694 574 ntBASIC34.66■■■■□ 3.14
CHIC1Q5VXU3 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC34.66■■■■□ 3.14
CHIC1Q5VXU3 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC34.66■■■■□ 3.14
CHIC1Q5VXU3 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
CHIC1Q5VXU3 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC34.66■■■■□ 3.14
CHIC1Q5VXU3 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC34.66■■■■□ 3.14
CHIC1Q5VXU3 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC34.66■■■■□ 3.14
CHIC1Q5VXU3 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC34.65■■■■□ 3.14
CHIC1Q5VXU3 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC34.65■■■■□ 3.14
CHIC1Q5VXU3 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC34.65■■■■□ 3.14
CHIC1Q5VXU3 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC34.65■■■■□ 3.14
CHIC1Q5VXU3 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC34.65■■■■□ 3.14
CHIC1Q5VXU3 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC34.65■■■■□ 3.14
CHIC1Q5VXU3 METTL15-202ENST00000403099 795 ntTSL 5 BASIC34.65■■■■□ 3.14
CHIC1Q5VXU3 AL355472.2-201ENST00000422958 438 ntBASIC34.65■■■■□ 3.14
CHIC1Q5VXU3 MAP2K4P1-201ENST00000438453 1195 ntBASIC34.65■■■■□ 3.14
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms