Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC16.04■□□□□ 0.16
FAM78BQ5VT40 PBX2P1-201ENST00000493219 1291 ntBASIC16.04■□□□□ 0.16
FAM78BQ5VT40 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC16.04■□□□□ 0.16
FAM78BQ5VT40 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC16.04■□□□□ 0.16
FAM78BQ5VT40 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
FAM78BQ5VT40 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
FAM78BQ5VT40 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.04■□□□□ 0.16
FAM78BQ5VT40 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
FAM78BQ5VT40 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
FAM78BQ5VT40 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC16.04■□□□□ 0.16
FAM78BQ5VT40 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
FAM78BQ5VT40 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
FAM78BQ5VT40 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
FAM78BQ5VT40 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
FAM78BQ5VT40 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
FAM78BQ5VT40 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
FAM78BQ5VT40 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FAM78BQ5VT40 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
FAM78BQ5VT40 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC16.03■□□□□ 0.16
FAM78BQ5VT40 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
FAM78BQ5VT40 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FAM78BQ5VT40 FXN-202ENST00000396364 980 ntTSL 5 BASIC16.03■□□□□ 0.16
FAM78BQ5VT40 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC16.03■□□□□ 0.16
FAM78BQ5VT40 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC16.03■□□□□ 0.16
FAM78BQ5VT40 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
FAM78BQ5VT40 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FAM78BQ5VT40 BX005040.4-201ENST00000637145 1518 ntBASIC16.03■□□□□ 0.16
FAM78BQ5VT40 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
FAM78BQ5VT40 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
FAM78BQ5VT40 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
FAM78BQ5VT40 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC16.02■□□□□ 0.16
FAM78BQ5VT40 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
FAM78BQ5VT40 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.02■□□□□ 0.16
FAM78BQ5VT40 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FAM78BQ5VT40 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
FAM78BQ5VT40 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16.02■□□□□ 0.16
FAM78BQ5VT40 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
FAM78BQ5VT40 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
FAM78BQ5VT40 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
FAM78BQ5VT40 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC16.02■□□□□ 0.16
FAM78BQ5VT40 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FAM78BQ5VT40 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC16.02■□□□□ 0.16
FAM78BQ5VT40 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC16.02■□□□□ 0.16
FAM78BQ5VT40 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC16.02■□□□□ 0.16
FAM78BQ5VT40 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC16.02■□□□□ 0.16
FAM78BQ5VT40 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
FAM78BQ5VT40 AC233992.3-201ENST00000607491 485 ntBASIC16.02■□□□□ 0.16
FAM78BQ5VT40 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
FAM78BQ5VT40 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FAM78BQ5VT40 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
FAM78BQ5VT40 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
FAM78BQ5VT40 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
FAM78BQ5VT40 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
FAM78BQ5VT40 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
FAM78BQ5VT40 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC16.02■□□□□ 0.15
FAM78BQ5VT40 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC16.02■□□□□ 0.15
FAM78BQ5VT40 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
FAM78BQ5VT40 EXOC3-AS1-202ENST00000623673 1663 ntBASIC16.02■□□□□ 0.15
FAM78BQ5VT40 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
FAM78BQ5VT40 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
FAM78BQ5VT40 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
FAM78BQ5VT40 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FAM78BQ5VT40 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.01■□□□□ 0.15
FAM78BQ5VT40 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.01■□□□□ 0.15
FAM78BQ5VT40 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FAM78BQ5VT40 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
FAM78BQ5VT40 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
FAM78BQ5VT40 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC16.01■□□□□ 0.15
FAM78BQ5VT40 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
FAM78BQ5VT40 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC16.01■□□□□ 0.15
FAM78BQ5VT40 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC16.01■□□□□ 0.15
FAM78BQ5VT40 AC126544.1-201ENST00000580842 1059 ntBASIC16.01■□□□□ 0.15
FAM78BQ5VT40 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
FAM78BQ5VT40 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
FAM78BQ5VT40 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
FAM78BQ5VT40 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
FAM78BQ5VT40 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.01■□□□□ 0.15
FAM78BQ5VT40 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
FAM78BQ5VT40 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
FAM78BQ5VT40 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FAM78BQ5VT40 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
FAM78BQ5VT40 AC092720.2-201ENST00000602388 1665 ntBASIC16.01■□□□□ 0.15
FAM78BQ5VT40 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
FAM78BQ5VT40 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC16.01■□□□□ 0.15
FAM78BQ5VT40 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC16.01■□□□□ 0.15
FAM78BQ5VT40 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FAM78BQ5VT40 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
FAM78BQ5VT40 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
FAM78BQ5VT40 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
FAM78BQ5VT40 AC055733.4-201ENST00000638462 1354 ntBASIC16■□□□□ 0.15
FAM78BQ5VT40 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
FAM78BQ5VT40 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
FAM78BQ5VT40 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
FAM78BQ5VT40 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16■□□□□ 0.15
FAM78BQ5VT40 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
FAM78BQ5VT40 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FAM78BQ5VT40 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
FAM78BQ5VT40 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FAM78BQ5VT40 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FAM78BQ5VT40 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms