Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
RIF1Q5UIP0 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.89■□□□□ 0.77
RIF1Q5UIP0 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RIF1Q5UIP0 AL390719.1-204ENST00000412397 1219 ntBASIC19.89■□□□□ 0.77
RIF1Q5UIP0 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RIF1Q5UIP0 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.89■□□□□ 0.77
RIF1Q5UIP0 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
RIF1Q5UIP0 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
RIF1Q5UIP0 AC142381.3-201ENST00000568208 1670 ntBASIC19.88■□□□□ 0.77
RIF1Q5UIP0 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
RIF1Q5UIP0 HMGA1P5-201ENST00000412453 271 ntBASIC19.88■□□□□ 0.77
RIF1Q5UIP0 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.88■□□□□ 0.77
RIF1Q5UIP0 AC069148.1-201ENST00000608741 768 ntBASIC19.88■□□□□ 0.77
RIF1Q5UIP0 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.88■□□□□ 0.77
RIF1Q5UIP0 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
RIF1Q5UIP0 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
RIF1Q5UIP0 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RIF1Q5UIP0 KRT16P1-201ENST00000399124 1418 ntBASIC19.88■□□□□ 0.77
RIF1Q5UIP0 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RIF1Q5UIP0 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RIF1Q5UIP0 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RIF1Q5UIP0 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
RIF1Q5UIP0 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
RIF1Q5UIP0 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.88■□□□□ 0.77
RIF1Q5UIP0 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.88■□□□□ 0.77
RIF1Q5UIP0 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RIF1Q5UIP0 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RIF1Q5UIP0 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RIF1Q5UIP0 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.88■□□□□ 0.77
RIF1Q5UIP0 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.88■□□□□ 0.77
RIF1Q5UIP0 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RIF1Q5UIP0 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.88■□□□□ 0.77
RIF1Q5UIP0 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RIF1Q5UIP0 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RIF1Q5UIP0 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RIF1Q5UIP0 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RIF1Q5UIP0 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.88■□□□□ 0.77
RIF1Q5UIP0 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.87■□□□□ 0.77
RIF1Q5UIP0 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.87■□□□□ 0.77
RIF1Q5UIP0 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RIF1Q5UIP0 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.87■□□□□ 0.77
RIF1Q5UIP0 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RIF1Q5UIP0 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.87■□□□□ 0.77
RIF1Q5UIP0 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RIF1Q5UIP0 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RIF1Q5UIP0 AC092068.2-201ENST00000590491 1708 ntBASIC19.87■□□□□ 0.77
RIF1Q5UIP0 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.87■□□□□ 0.77
RIF1Q5UIP0 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.87■□□□□ 0.77
RIF1Q5UIP0 AC130371.2-201ENST00000619443 611 ntBASIC19.87■□□□□ 0.77
RIF1Q5UIP0 AL138966.2-201ENST00000621997 464 ntBASIC19.87■□□□□ 0.77
RIF1Q5UIP0 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RIF1Q5UIP0 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RIF1Q5UIP0 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RIF1Q5UIP0 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
RIF1Q5UIP0 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
RIF1Q5UIP0 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.86■□□□□ 0.77
RIF1Q5UIP0 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RIF1Q5UIP0 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.86■□□□□ 0.77
RIF1Q5UIP0 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RIF1Q5UIP0 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.86■□□□□ 0.77
RIF1Q5UIP0 AL031985.4-201ENST00000642138 673 ntBASIC19.86■□□□□ 0.77
RIF1Q5UIP0 AC005332.1-201ENST00000577698 1310 ntBASIC19.86■□□□□ 0.77
RIF1Q5UIP0 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.86■□□□□ 0.77
RIF1Q5UIP0 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RIF1Q5UIP0 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.86■□□□□ 0.77
RIF1Q5UIP0 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
RIF1Q5UIP0 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
RIF1Q5UIP0 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.86■□□□□ 0.77
RIF1Q5UIP0 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.86■□□□□ 0.77
RIF1Q5UIP0 CR392000.1-201ENST00000624770 1228 ntBASIC19.86■□□□□ 0.77
RIF1Q5UIP0 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
RIF1Q5UIP0 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
RIF1Q5UIP0 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.86■□□□□ 0.77
RIF1Q5UIP0 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RIF1Q5UIP0 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RIF1Q5UIP0 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RIF1Q5UIP0 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.85■□□□□ 0.77
RIF1Q5UIP0 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.85■□□□□ 0.77
RIF1Q5UIP0 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.85■□□□□ 0.77
RIF1Q5UIP0 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.85■□□□□ 0.77
RIF1Q5UIP0 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.85■□□□□ 0.77
RIF1Q5UIP0 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RIF1Q5UIP0 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.85■□□□□ 0.77
RIF1Q5UIP0 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RIF1Q5UIP0 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.84■□□□□ 0.77
RIF1Q5UIP0 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
RIF1Q5UIP0 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RIF1Q5UIP0 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RIF1Q5UIP0 INGX-201ENST00000359239 846 ntBASIC19.84■□□□□ 0.77
RIF1Q5UIP0 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.84■□□□□ 0.77
RIF1Q5UIP0 PGM5P4-201ENST00000421970 445 ntBASIC19.84■□□□□ 0.77
RIF1Q5UIP0 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.84■□□□□ 0.77
RIF1Q5UIP0 AC128688.1-201ENST00000487626 519 ntBASIC19.84■□□□□ 0.77
RIF1Q5UIP0 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.84■□□□□ 0.77
RIF1Q5UIP0 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RIF1Q5UIP0 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RIF1Q5UIP0 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RIF1Q5UIP0 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RIF1Q5UIP0 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RIF1Q5UIP0 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms