Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC23.12■■□□□ 1.29
COL13A1Q5TAT6 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
COL13A1Q5TAT6 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC23.12■■□□□ 1.29
COL13A1Q5TAT6 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL13A1Q5TAT6 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC23.11■■□□□ 1.29
COL13A1Q5TAT6 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
COL13A1Q5TAT6 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL13A1Q5TAT6 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL13A1Q5TAT6 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC23.11■■□□□ 1.29
COL13A1Q5TAT6 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC23.11■■□□□ 1.29
COL13A1Q5TAT6 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC23.11■■□□□ 1.29
COL13A1Q5TAT6 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC23.11■■□□□ 1.29
COL13A1Q5TAT6 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC23.11■■□□□ 1.29
COL13A1Q5TAT6 BX640515.1-201ENST00000617215 977 ntBASIC23.11■■□□□ 1.29
COL13A1Q5TAT6 AL031432.5-201ENST00000641059 760 ntBASIC23.11■■□□□ 1.29
COL13A1Q5TAT6 AF228730.7-201ENST00000641842 219 ntBASIC23.11■■□□□ 1.29
COL13A1Q5TAT6 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
COL13A1Q5TAT6 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC23.1■■□□□ 1.29
COL13A1Q5TAT6 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.1■■□□□ 1.29
COL13A1Q5TAT6 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.1■■□□□ 1.29
COL13A1Q5TAT6 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
COL13A1Q5TAT6 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL13A1Q5TAT6 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
COL13A1Q5TAT6 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
COL13A1Q5TAT6 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
COL13A1Q5TAT6 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC23.1■■□□□ 1.29
COL13A1Q5TAT6 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC23.1■■□□□ 1.29
COL13A1Q5TAT6 AL031985.4-201ENST00000642138 673 ntBASIC23.1■■□□□ 1.29
COL13A1Q5TAT6 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL13A1Q5TAT6 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL13A1Q5TAT6 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL13A1Q5TAT6 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL13A1Q5TAT6 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL13A1Q5TAT6 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC23.09■■□□□ 1.29
COL13A1Q5TAT6 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
COL13A1Q5TAT6 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
COL13A1Q5TAT6 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
COL13A1Q5TAT6 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
COL13A1Q5TAT6 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
COL13A1Q5TAT6 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
COL13A1Q5TAT6 AL441883.1-201ENST00000566170 1045 ntBASIC23.09■■□□□ 1.29
COL13A1Q5TAT6 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
COL13A1Q5TAT6 AC124283.5-201ENST00000624661 1809 ntBASIC23.09■■□□□ 1.29
COL13A1Q5TAT6 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
COL13A1Q5TAT6 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
COL13A1Q5TAT6 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC23.08■■□□□ 1.29
COL13A1Q5TAT6 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
COL13A1Q5TAT6 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC23.08■■□□□ 1.29
COL13A1Q5TAT6 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC23.08■■□□□ 1.29
COL13A1Q5TAT6 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC23.08■■□□□ 1.29
COL13A1Q5TAT6 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
COL13A1Q5TAT6 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
COL13A1Q5TAT6 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
COL13A1Q5TAT6 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
COL13A1Q5TAT6 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
COL13A1Q5TAT6 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
COL13A1Q5TAT6 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
COL13A1Q5TAT6 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
COL13A1Q5TAT6 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
COL13A1Q5TAT6 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
COL13A1Q5TAT6 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
COL13A1Q5TAT6 HIST1H2APS4-201ENST00000362070 348 ntBASIC23.07■■□□□ 1.28
COL13A1Q5TAT6 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC23.07■■□□□ 1.28
COL13A1Q5TAT6 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
COL13A1Q5TAT6 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC23.07■■□□□ 1.28
COL13A1Q5TAT6 PMS2P2-201ENST00000425039 1128 ntBASIC23.07■■□□□ 1.28
COL13A1Q5TAT6 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
COL13A1Q5TAT6 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC23.07■■□□□ 1.28
COL13A1Q5TAT6 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
COL13A1Q5TAT6 DGCR10-201ENST00000609839 495 ntBASIC23.07■■□□□ 1.28
COL13A1Q5TAT6 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC23.07■■□□□ 1.28
COL13A1Q5TAT6 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
COL13A1Q5TAT6 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC23.07■■□□□ 1.28
COL13A1Q5TAT6 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
COL13A1Q5TAT6 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC23.06■■□□□ 1.28
COL13A1Q5TAT6 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
COL13A1Q5TAT6 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
COL13A1Q5TAT6 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
COL13A1Q5TAT6 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC23.06■■□□□ 1.28
COL13A1Q5TAT6 AL590627.1-203ENST00000421194 1026 ntBASIC23.06■■□□□ 1.28
COL13A1Q5TAT6 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC23.06■■□□□ 1.28
COL13A1Q5TAT6 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC23.06■■□□□ 1.28
COL13A1Q5TAT6 DFFB-212ENST00000625756 649 ntTSL 5 BASIC23.06■■□□□ 1.28
COL13A1Q5TAT6 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
COL13A1Q5TAT6 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC23.06■■□□□ 1.28
COL13A1Q5TAT6 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
COL13A1Q5TAT6 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC23.06■■□□□ 1.28
COL13A1Q5TAT6 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
COL13A1Q5TAT6 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL13A1Q5TAT6 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL13A1Q5TAT6 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC23.05■■□□□ 1.28
COL13A1Q5TAT6 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL13A1Q5TAT6 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL13A1Q5TAT6 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC23.05■■□□□ 1.28
COL13A1Q5TAT6 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL13A1Q5TAT6 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
COL13A1Q5TAT6 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC23.05■■□□□ 1.28
COL13A1Q5TAT6 PTPA-214ENST00000423100 988 ntTSL 2 BASIC23.05■■□□□ 1.28
COL13A1Q5TAT6 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL13A1Q5TAT6 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC23.05■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms