Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC13.84□□□□□ -0.19
LINC00242Q5T6M2 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC13.84□□□□□ -0.19
LINC00242Q5T6M2 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC00242Q5T6M2 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC13.84□□□□□ -0.19
LINC00242Q5T6M2 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
LINC00242Q5T6M2 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC00242Q5T6M2 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
LINC00242Q5T6M2 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
LINC00242Q5T6M2 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC00242Q5T6M2 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
LINC00242Q5T6M2 H19-201ENST00000411754 1788 ntTSL 5 BASIC13.83□□□□□ -0.19
LINC00242Q5T6M2 AC116050.2-201ENST00000612102 1779 ntBASIC13.83□□□□□ -0.19
LINC00242Q5T6M2 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC13.83□□□□□ -0.19
LINC00242Q5T6M2 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
LINC00242Q5T6M2 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00242Q5T6M2 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00242Q5T6M2 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00242Q5T6M2 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC13.83□□□□□ -0.2
LINC00242Q5T6M2 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00242Q5T6M2 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00242Q5T6M2 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
LINC00242Q5T6M2 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
LINC00242Q5T6M2 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00242Q5T6M2 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00242Q5T6M2 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00242Q5T6M2 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00242Q5T6M2 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC13.83□□□□□ -0.2
LINC00242Q5T6M2 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00242Q5T6M2 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC13.83□□□□□ -0.2
LINC00242Q5T6M2 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC13.83□□□□□ -0.2
LINC00242Q5T6M2 AC027682.1-201ENST00000562846 899 ntBASIC13.83□□□□□ -0.2
LINC00242Q5T6M2 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
LINC00242Q5T6M2 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC13.83□□□□□ -0.2
LINC00242Q5T6M2 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00242Q5T6M2 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
LINC00242Q5T6M2 AP000974.1-201ENST00000623909 2387 ntBASIC13.83□□□□□ -0.2
LINC00242Q5T6M2 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00242Q5T6M2 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC13.83□□□□□ -0.2
LINC00242Q5T6M2 MPST-204ENST00000404393 1329 ntTSL 5 BASIC13.83□□□□□ -0.2
LINC00242Q5T6M2 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00242Q5T6M2 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00242Q5T6M2 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00242Q5T6M2 TMEM179-206ENST00000616017 1645 ntBASIC13.82□□□□□ -0.2
LINC00242Q5T6M2 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC13.82□□□□□ -0.2
LINC00242Q5T6M2 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC13.82□□□□□ -0.2
LINC00242Q5T6M2 KRT16P2-201ENST00000414673 1423 ntBASIC13.82□□□□□ -0.2
LINC00242Q5T6M2 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00242Q5T6M2 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC13.82□□□□□ -0.2
LINC00242Q5T6M2 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
LINC00242Q5T6M2 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00242Q5T6M2 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC13.82□□□□□ -0.2
LINC00242Q5T6M2 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00242Q5T6M2 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC13.82□□□□□ -0.2
LINC00242Q5T6M2 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00242Q5T6M2 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00242Q5T6M2 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00242Q5T6M2 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00242Q5T6M2 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00242Q5T6M2 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00242Q5T6M2 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00242Q5T6M2 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00242Q5T6M2 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00242Q5T6M2 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC13.82□□□□□ -0.2
LINC00242Q5T6M2 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC13.82□□□□□ -0.2
LINC00242Q5T6M2 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC13.82□□□□□ -0.2
LINC00242Q5T6M2 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC13.82□□□□□ -0.2
LINC00242Q5T6M2 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC13.82□□□□□ -0.2
LINC00242Q5T6M2 CPT2-209ENST00000636935 803 ntTSL 5 BASIC13.82□□□□□ -0.2
LINC00242Q5T6M2 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
LINC00242Q5T6M2 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00242Q5T6M2 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00242Q5T6M2 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00242Q5T6M2 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
LINC00242Q5T6M2 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00242Q5T6M2 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC13.82□□□□□ -0.2
LINC00242Q5T6M2 AL691432.2-201ENST00000607222 2038 ntBASIC13.81□□□□□ -0.2
LINC00242Q5T6M2 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00242Q5T6M2 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00242Q5T6M2 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00242Q5T6M2 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00242Q5T6M2 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00242Q5T6M2 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00242Q5T6M2 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00242Q5T6M2 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00242Q5T6M2 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00242Q5T6M2 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00242Q5T6M2 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC13.81□□□□□ -0.2
LINC00242Q5T6M2 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00242Q5T6M2 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC13.81□□□□□ -0.2
LINC00242Q5T6M2 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC13.81□□□□□ -0.2
LINC00242Q5T6M2 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC13.81□□□□□ -0.2
LINC00242Q5T6M2 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00242Q5T6M2 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00242Q5T6M2 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC13.81□□□□□ -0.2
LINC00242Q5T6M2 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00242Q5T6M2 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00242Q5T6M2 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC13.81□□□□□ -0.2
LINC00242Q5T6M2 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00242Q5T6M2 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00242Q5T6M2 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms