Protein–RNA interactions for Protein: Q53S08

RAB6C, Rab6C, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6CQ53S08 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.15■□□□□ 0.98
RAB6CQ53S08 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAB6CQ53S08 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
RAB6CQ53S08 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RAB6CQ53S08 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAB6CQ53S08 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.15■□□□□ 0.98
RAB6CQ53S08 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
RAB6CQ53S08 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.15■□□□□ 0.98
RAB6CQ53S08 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAB6CQ53S08 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RAB6CQ53S08 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAB6CQ53S08 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAB6CQ53S08 MKRN4P-201ENST00000444706 1521 ntBASIC21.14■□□□□ 0.98
RAB6CQ53S08 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
RAB6CQ53S08 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RAB6CQ53S08 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
RAB6CQ53S08 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
RAB6CQ53S08 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.14■□□□□ 0.98
RAB6CQ53S08 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.14■□□□□ 0.97
RAB6CQ53S08 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RAB6CQ53S08 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RAB6CQ53S08 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RAB6CQ53S08 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.14■□□□□ 0.97
RAB6CQ53S08 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.14■□□□□ 0.97
RAB6CQ53S08 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.14■□□□□ 0.97
RAB6CQ53S08 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RAB6CQ53S08 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.14■□□□□ 0.97
RAB6CQ53S08 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RAB6CQ53S08 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.14■□□□□ 0.97
RAB6CQ53S08 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RAB6CQ53S08 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.14■□□□□ 0.97
RAB6CQ53S08 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RAB6CQ53S08 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RAB6CQ53S08 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
RAB6CQ53S08 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAB6CQ53S08 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAB6CQ53S08 DPP3P2-201ENST00000416030 1696 ntBASIC21.13■□□□□ 0.97
RAB6CQ53S08 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.13■□□□□ 0.97
RAB6CQ53S08 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.13■□□□□ 0.97
RAB6CQ53S08 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RAB6CQ53S08 BX276092.2-201ENST00000417668 665 ntBASIC21.13■□□□□ 0.97
RAB6CQ53S08 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.13■□□□□ 0.97
RAB6CQ53S08 AC098934.4-201ENST00000564127 592 ntBASIC21.13■□□□□ 0.97
RAB6CQ53S08 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
RAB6CQ53S08 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.13■□□□□ 0.97
RAB6CQ53S08 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
RAB6CQ53S08 AC105020.6-201ENST00000621523 1217 ntBASIC21.13■□□□□ 0.97
RAB6CQ53S08 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.13■□□□□ 0.97
RAB6CQ53S08 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAB6CQ53S08 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RAB6CQ53S08 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.13■□□□□ 0.97
RAB6CQ53S08 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RAB6CQ53S08 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RAB6CQ53S08 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
RAB6CQ53S08 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.12■□□□□ 0.97
RAB6CQ53S08 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.12■□□□□ 0.97
RAB6CQ53S08 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RAB6CQ53S08 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.12■□□□□ 0.97
RAB6CQ53S08 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
RAB6CQ53S08 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.12■□□□□ 0.97
RAB6CQ53S08 TSPY6P-201ENST00000448518 926 ntBASIC21.12■□□□□ 0.97
RAB6CQ53S08 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.12■□□□□ 0.97
RAB6CQ53S08 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.12■□□□□ 0.97
RAB6CQ53S08 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.12■□□□□ 0.97
RAB6CQ53S08 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.12■□□□□ 0.97
RAB6CQ53S08 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RAB6CQ53S08 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RAB6CQ53S08 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.12■□□□□ 0.97
RAB6CQ53S08 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RAB6CQ53S08 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.12■□□□□ 0.97
RAB6CQ53S08 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RAB6CQ53S08 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
RAB6CQ53S08 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RAB6CQ53S08 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
RAB6CQ53S08 MIPEPP3-201ENST00000412105 444 ntBASIC21.11■□□□□ 0.97
RAB6CQ53S08 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
RAB6CQ53S08 AC099778.1-201ENST00000568593 1911 ntBASIC21.11■□□□□ 0.97
RAB6CQ53S08 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
RAB6CQ53S08 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.11■□□□□ 0.97
RAB6CQ53S08 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAB6CQ53S08 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.1■□□□□ 0.97
RAB6CQ53S08 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RAB6CQ53S08 GPX1P1-201ENST00000388829 606 ntBASIC21.1■□□□□ 0.97
RAB6CQ53S08 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.1■□□□□ 0.97
RAB6CQ53S08 AL138781.1-201ENST00000566567 1274 ntBASIC21.1■□□□□ 0.97
RAB6CQ53S08 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.1■□□□□ 0.97
RAB6CQ53S08 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
RAB6CQ53S08 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAB6CQ53S08 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
RAB6CQ53S08 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAB6CQ53S08 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.1■□□□□ 0.97
RAB6CQ53S08 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAB6CQ53S08 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.09■□□□□ 0.97
RAB6CQ53S08 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.09■□□□□ 0.97
RAB6CQ53S08 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
RAB6CQ53S08 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAB6CQ53S08 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RAB6CQ53S08 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAB6CQ53S08 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.09■□□□□ 0.97
RAB6CQ53S08 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms