Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
CERKLQ49MI3 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC23.83■■□□□ 1.4
CERKLQ49MI3 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
CERKLQ49MI3 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CERKLQ49MI3 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CERKLQ49MI3 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CERKLQ49MI3 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CERKLQ49MI3 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC23.82■■□□□ 1.4
CERKLQ49MI3 MIR718-201ENST00000390190 70 ntBASIC23.82■■□□□ 1.4
CERKLQ49MI3 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC23.82■■□□□ 1.4
CERKLQ49MI3 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC23.82■■□□□ 1.4
CERKLQ49MI3 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
CERKLQ49MI3 Z99916.2-201ENST00000604037 246 ntBASIC23.82■■□□□ 1.4
CERKLQ49MI3 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CERKLQ49MI3 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CERKLQ49MI3 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CERKLQ49MI3 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CERKLQ49MI3 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CERKLQ49MI3 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC23.82■■□□□ 1.4
CERKLQ49MI3 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CERKLQ49MI3 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CERKLQ49MI3 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC23.81■■□□□ 1.4
CERKLQ49MI3 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC23.81■■□□□ 1.4
CERKLQ49MI3 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
CERKLQ49MI3 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
CERKLQ49MI3 AC124016.1-201ENST00000609552 612 ntBASIC23.81■■□□□ 1.4
CERKLQ49MI3 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CERKLQ49MI3 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CERKLQ49MI3 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
CERKLQ49MI3 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
CERKLQ49MI3 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CERKLQ49MI3 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC23.81■■□□□ 1.4
CERKLQ49MI3 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CERKLQ49MI3 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CERKLQ49MI3 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CERKLQ49MI3 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CERKLQ49MI3 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
CERKLQ49MI3 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CERKLQ49MI3 SERF2-207ENST00000409614 582 ntTSL 2 BASIC23.8■■□□□ 1.4
CERKLQ49MI3 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CERKLQ49MI3 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
CERKLQ49MI3 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC23.8■■□□□ 1.4
CERKLQ49MI3 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC23.8■■□□□ 1.4
CERKLQ49MI3 HES2-206ENST00000489730 730 ntTSL 2 BASIC23.8■■□□□ 1.4
CERKLQ49MI3 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC23.8■■□□□ 1.4
CERKLQ49MI3 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC23.8■■□□□ 1.4
CERKLQ49MI3 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC23.8■■□□□ 1.4
CERKLQ49MI3 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CERKLQ49MI3 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC23.8■■□□□ 1.4
CERKLQ49MI3 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CERKLQ49MI3 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CERKLQ49MI3 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC23.8■■□□□ 1.4
CERKLQ49MI3 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC23.8■■□□□ 1.4
CERKLQ49MI3 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
CERKLQ49MI3 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC23.8■■□□□ 1.4
CERKLQ49MI3 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CERKLQ49MI3 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CERKLQ49MI3 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CERKLQ49MI3 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CERKLQ49MI3 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CERKLQ49MI3 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CERKLQ49MI3 AC133681.1-201ENST00000465482 601 ntBASIC23.79■■□□□ 1.4
CERKLQ49MI3 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CERKLQ49MI3 AC023632.3-201ENST00000521633 145 ntBASIC23.79■■□□□ 1.4
CERKLQ49MI3 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC23.79■■□□□ 1.4
CERKLQ49MI3 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC23.79■■□□□ 1.4
CERKLQ49MI3 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CERKLQ49MI3 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CERKLQ49MI3 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CERKLQ49MI3 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CERKLQ49MI3 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC23.78■■□□□ 1.4
CERKLQ49MI3 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CERKLQ49MI3 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CERKLQ49MI3 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
CERKLQ49MI3 AC239809.2-201ENST00000415381 517 ntBASIC23.78■■□□□ 1.4
CERKLQ49MI3 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CERKLQ49MI3 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC23.78■■□□□ 1.4
CERKLQ49MI3 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CERKLQ49MI3 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
CERKLQ49MI3 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CERKLQ49MI3 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CERKLQ49MI3 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC23.78■■□□□ 1.4
CERKLQ49MI3 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CERKLQ49MI3 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CERKLQ49MI3 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CERKLQ49MI3 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CERKLQ49MI3 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CERKLQ49MI3 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC23.77■■□□□ 1.4
CERKLQ49MI3 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
CERKLQ49MI3 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CERKLQ49MI3 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC23.77■■□□□ 1.4
CERKLQ49MI3 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC23.77■■□□□ 1.4
CERKLQ49MI3 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC23.77■■□□□ 1.4
CERKLQ49MI3 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC23.77■■□□□ 1.4
CERKLQ49MI3 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
CERKLQ49MI3 AF106564.1-201ENST00000607058 2553 ntBASIC23.77■■□□□ 1.4
CERKLQ49MI3 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CERKLQ49MI3 PLK5-205ENST00000642079 1969 ntBASIC23.76■■□□□ 1.39
CERKLQ49MI3 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CERKLQ49MI3 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms