Protein–RNA interactions for Protein: Q3MHD2

LSM12, Protein LSM12 homolog, humanhuman

Known RBP Predictions only

Length 195 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12Q3MHD2 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
LSM12Q3MHD2 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LSM12Q3MHD2 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LSM12Q3MHD2 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
LSM12Q3MHD2 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LSM12Q3MHD2 IRS3P-201ENST00000223076 1006 ntBASIC19.69■□□□□ 0.74
LSM12Q3MHD2 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
LSM12Q3MHD2 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
LSM12Q3MHD2 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.69■□□□□ 0.74
LSM12Q3MHD2 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LSM12Q3MHD2 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LSM12Q3MHD2 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LSM12Q3MHD2 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
LSM12Q3MHD2 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
LSM12Q3MHD2 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LSM12Q3MHD2 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.68■□□□□ 0.74
LSM12Q3MHD2 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
LSM12Q3MHD2 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
LSM12Q3MHD2 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LSM12Q3MHD2 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LSM12Q3MHD2 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LSM12Q3MHD2 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
LSM12Q3MHD2 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LSM12Q3MHD2 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.68■□□□□ 0.74
LSM12Q3MHD2 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LSM12Q3MHD2 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.68■□□□□ 0.74
LSM12Q3MHD2 AC245052.3-201ENST00000450182 901 ntBASIC19.68■□□□□ 0.74
LSM12Q3MHD2 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.68■□□□□ 0.74
LSM12Q3MHD2 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LSM12Q3MHD2 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LSM12Q3MHD2 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LSM12Q3MHD2 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LSM12Q3MHD2 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.68■□□□□ 0.74
LSM12Q3MHD2 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
LSM12Q3MHD2 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.67■□□□□ 0.74
LSM12Q3MHD2 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
LSM12Q3MHD2 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LSM12Q3MHD2 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LSM12Q3MHD2 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LSM12Q3MHD2 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LSM12Q3MHD2 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LSM12Q3MHD2 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
LSM12Q3MHD2 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LSM12Q3MHD2 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
LSM12Q3MHD2 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LSM12Q3MHD2 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
LSM12Q3MHD2 AC116050.2-201ENST00000612102 1779 ntBASIC19.67■□□□□ 0.74
LSM12Q3MHD2 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LSM12Q3MHD2 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LSM12Q3MHD2 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LSM12Q3MHD2 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LSM12Q3MHD2 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LSM12Q3MHD2 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LSM12Q3MHD2 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
LSM12Q3MHD2 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LSM12Q3MHD2 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
LSM12Q3MHD2 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LSM12Q3MHD2 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LSM12Q3MHD2 AC079140.4-201ENST00000507448 529 ntBASIC19.66■□□□□ 0.74
LSM12Q3MHD2 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.66■□□□□ 0.74
LSM12Q3MHD2 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.66■□□□□ 0.74
LSM12Q3MHD2 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LSM12Q3MHD2 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.66■□□□□ 0.74
LSM12Q3MHD2 KRT16P2-201ENST00000414673 1423 ntBASIC19.66■□□□□ 0.74
LSM12Q3MHD2 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LSM12Q3MHD2 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
LSM12Q3MHD2 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
LSM12Q3MHD2 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LSM12Q3MHD2 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
LSM12Q3MHD2 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.65■□□□□ 0.74
LSM12Q3MHD2 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LSM12Q3MHD2 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.65■□□□□ 0.74
LSM12Q3MHD2 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LSM12Q3MHD2 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LSM12Q3MHD2 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
LSM12Q3MHD2 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.65■□□□□ 0.74
LSM12Q3MHD2 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
LSM12Q3MHD2 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LSM12Q3MHD2 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LSM12Q3MHD2 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LSM12Q3MHD2 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LSM12Q3MHD2 AC105265.2-201ENST00000467189 838 ntBASIC19.65■□□□□ 0.74
LSM12Q3MHD2 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LSM12Q3MHD2 MIR6084-201ENST00000622012 110 ntBASIC19.65■□□□□ 0.74
LSM12Q3MHD2 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LSM12Q3MHD2 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.65■□□□□ 0.74
LSM12Q3MHD2 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LSM12Q3MHD2 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
LSM12Q3MHD2 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LSM12Q3MHD2 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
LSM12Q3MHD2 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LSM12Q3MHD2 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.65■□□□□ 0.74
LSM12Q3MHD2 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.65■□□□□ 0.74
LSM12Q3MHD2 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LSM12Q3MHD2 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LSM12Q3MHD2 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.65■□□□□ 0.74
LSM12Q3MHD2 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
LSM12Q3MHD2 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
LSM12Q3MHD2 AL691432.2-201ENST00000607222 2038 ntBASIC19.64■□□□□ 0.74
LSM12Q3MHD2 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms