Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 SERF2-207ENST00000409614 582 ntTSL 2 BASIC24.45■■□□□ 1.5
PDS5AQ29RF7 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC24.45■■□□□ 1.5
PDS5AQ29RF7 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PDS5AQ29RF7 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PDS5AQ29RF7 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PDS5AQ29RF7 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
PDS5AQ29RF7 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
PDS5AQ29RF7 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC24.45■■□□□ 1.5
PDS5AQ29RF7 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PDS5AQ29RF7 AC026310.3-201ENST00000625186 2373 ntBASIC24.44■■□□□ 1.5
PDS5AQ29RF7 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PDS5AQ29RF7 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PDS5AQ29RF7 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PDS5AQ29RF7 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PDS5AQ29RF7 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PDS5AQ29RF7 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC24.44■■□□□ 1.5
PDS5AQ29RF7 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PDS5AQ29RF7 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
PDS5AQ29RF7 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
PDS5AQ29RF7 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PDS5AQ29RF7 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
PDS5AQ29RF7 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PDS5AQ29RF7 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PDS5AQ29RF7 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC24.43■■□□□ 1.5
PDS5AQ29RF7 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PDS5AQ29RF7 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC24.43■■□□□ 1.5
PDS5AQ29RF7 ISG20-202ENST00000379224 540 ntTSL 3 BASIC24.43■■□□□ 1.5
PDS5AQ29RF7 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC24.43■■□□□ 1.5
PDS5AQ29RF7 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PDS5AQ29RF7 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC24.43■■□□□ 1.5
PDS5AQ29RF7 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
PDS5AQ29RF7 MAX-217ENST00000557277 728 ntTSL 3 BASIC24.43■■□□□ 1.5
PDS5AQ29RF7 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC24.43■■□□□ 1.5
PDS5AQ29RF7 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC24.43■■□□□ 1.5
PDS5AQ29RF7 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC24.43■■□□□ 1.5
PDS5AQ29RF7 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PDS5AQ29RF7 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC24.43■■□□□ 1.5
PDS5AQ29RF7 WWC2-AS2-201ENST00000578387 2183 ntBASIC24.43■■□□□ 1.5
PDS5AQ29RF7 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PDS5AQ29RF7 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC24.43■■□□□ 1.5
PDS5AQ29RF7 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PDS5AQ29RF7 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC24.42■■□□□ 1.5
PDS5AQ29RF7 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC24.42■■□□□ 1.5
PDS5AQ29RF7 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC24.42■■□□□ 1.5
PDS5AQ29RF7 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PDS5AQ29RF7 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC24.42■■□□□ 1.5
PDS5AQ29RF7 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC24.42■■□□□ 1.5
PDS5AQ29RF7 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC24.42■■□□□ 1.5
PDS5AQ29RF7 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PDS5AQ29RF7 MME-217ENST00000616757 1315 ntTSL 5 BASIC24.42■■□□□ 1.5
PDS5AQ29RF7 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PDS5AQ29RF7 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PDS5AQ29RF7 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
PDS5AQ29RF7 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PDS5AQ29RF7 CLDN5-201ENST00000403084 2357 ntBASIC24.41■■□□□ 1.5
PDS5AQ29RF7 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC24.41■■□□□ 1.5
PDS5AQ29RF7 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PDS5AQ29RF7 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC24.41■■□□□ 1.5
PDS5AQ29RF7 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PDS5AQ29RF7 AC008550.1-201ENST00000511500 884 ntBASIC24.41■■□□□ 1.5
PDS5AQ29RF7 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC24.41■■□□□ 1.5
PDS5AQ29RF7 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
PDS5AQ29RF7 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC24.41■■□□□ 1.5
PDS5AQ29RF7 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC24.41■■□□□ 1.5
PDS5AQ29RF7 AC124016.1-201ENST00000609552 612 ntBASIC24.41■■□□□ 1.5
PDS5AQ29RF7 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PDS5AQ29RF7 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PDS5AQ29RF7 AL121603.2-201ENST00000557373 2117 ntBASIC24.41■■□□□ 1.5
PDS5AQ29RF7 AF106564.1-201ENST00000607058 2553 ntBASIC24.41■■□□□ 1.5
PDS5AQ29RF7 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PDS5AQ29RF7 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
PDS5AQ29RF7 AC006128.1-201ENST00000624704 1661 ntBASIC24.41■■□□□ 1.5
PDS5AQ29RF7 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC24.4■■□□□ 1.5
PDS5AQ29RF7 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PDS5AQ29RF7 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
PDS5AQ29RF7 THEM4-205ENST00000489410 643 ntTSL 2 BASIC24.4■■□□□ 1.5
PDS5AQ29RF7 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC24.4■■□□□ 1.5
PDS5AQ29RF7 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC24.4■■□□□ 1.5
PDS5AQ29RF7 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC24.4■■□□□ 1.5
PDS5AQ29RF7 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
PDS5AQ29RF7 FAM197Y4-202ENST00000622692 608 ntBASIC24.4■■□□□ 1.5
PDS5AQ29RF7 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC24.4■■□□□ 1.5
PDS5AQ29RF7 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC24.4■■□□□ 1.5
PDS5AQ29RF7 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC24.4■■□□□ 1.5
PDS5AQ29RF7 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC24.4■■□□□ 1.5
PDS5AQ29RF7 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PDS5AQ29RF7 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PDS5AQ29RF7 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC24.39■■□□□ 1.5
PDS5AQ29RF7 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
PDS5AQ29RF7 LY6E-205ENST00000519611 635 ntTSL 3 BASIC24.39■■□□□ 1.5
PDS5AQ29RF7 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC24.39■■□□□ 1.5
PDS5AQ29RF7 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC24.39■■□□□ 1.5
PDS5AQ29RF7 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
PDS5AQ29RF7 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PDS5AQ29RF7 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC24.39■■□□□ 1.49
PDS5AQ29RF7 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PDS5AQ29RF7 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
PDS5AQ29RF7 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
PDS5AQ29RF7 AL121829.2-201ENST00000620908 328 ntBASIC24.38■■□□□ 1.49
PDS5AQ29RF7 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC24.38■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms