Protein–RNA interactions for Protein: Q16695

HIST3H3, Histone H3.1t, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H3Q16695 AL050303.2-201ENST00000619798 666 ntBASIC17.92■□□□□ 0.46
HIST3H3Q16695 AC105020.6-201ENST00000621523 1217 ntBASIC17.92■□□□□ 0.46
HIST3H3Q16695 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.92■□□□□ 0.46
HIST3H3Q16695 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.92■□□□□ 0.46
HIST3H3Q16695 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HIST3H3Q16695 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.92■□□□□ 0.46
HIST3H3Q16695 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HIST3H3Q16695 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HIST3H3Q16695 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.92■□□□□ 0.46
HIST3H3Q16695 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
HIST3H3Q16695 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HIST3H3Q16695 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
HIST3H3Q16695 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.91■□□□□ 0.46
HIST3H3Q16695 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.91■□□□□ 0.46
HIST3H3Q16695 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HIST3H3Q16695 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HIST3H3Q16695 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.91■□□□□ 0.46
HIST3H3Q16695 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
HIST3H3Q16695 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HIST3H3Q16695 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HIST3H3Q16695 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HIST3H3Q16695 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HIST3H3Q16695 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.91■□□□□ 0.46
HIST3H3Q16695 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HIST3H3Q16695 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.91■□□□□ 0.46
HIST3H3Q16695 AC093787.1-201ENST00000450396 207 ntBASIC17.91■□□□□ 0.46
HIST3H3Q16695 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
HIST3H3Q16695 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.91■□□□□ 0.46
HIST3H3Q16695 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.91■□□□□ 0.46
HIST3H3Q16695 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.91■□□□□ 0.46
HIST3H3Q16695 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.91■□□□□ 0.46
HIST3H3Q16695 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HIST3H3Q16695 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.91■□□□□ 0.46
HIST3H3Q16695 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HIST3H3Q16695 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.91■□□□□ 0.46
HIST3H3Q16695 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
HIST3H3Q16695 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.91■□□□□ 0.46
HIST3H3Q16695 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HIST3H3Q16695 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HIST3H3Q16695 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HIST3H3Q16695 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HIST3H3Q16695 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.9■□□□□ 0.46
HIST3H3Q16695 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HIST3H3Q16695 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HIST3H3Q16695 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HIST3H3Q16695 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HIST3H3Q16695 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HIST3H3Q16695 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HIST3H3Q16695 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HIST3H3Q16695 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.9■□□□□ 0.46
HIST3H3Q16695 CROCCP5-201ENST00000436658 830 ntBASIC17.9■□□□□ 0.46
HIST3H3Q16695 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.9■□□□□ 0.46
HIST3H3Q16695 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
HIST3H3Q16695 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.9■□□□□ 0.46
HIST3H3Q16695 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HIST3H3Q16695 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HIST3H3Q16695 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HIST3H3Q16695 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
HIST3H3Q16695 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
HIST3H3Q16695 SMG8-203ENST00000578922 2178 ntBASIC17.9■□□□□ 0.46
HIST3H3Q16695 AC099778.1-201ENST00000568593 1911 ntBASIC17.9■□□□□ 0.46
HIST3H3Q16695 DPP3P2-201ENST00000416030 1696 ntBASIC17.9■□□□□ 0.46
HIST3H3Q16695 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.89■□□□□ 0.46
HIST3H3Q16695 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
HIST3H3Q16695 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
HIST3H3Q16695 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.89■□□□□ 0.46
HIST3H3Q16695 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
HIST3H3Q16695 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HIST3H3Q16695 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HIST3H3Q16695 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.89■□□□□ 0.45
HIST3H3Q16695 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HIST3H3Q16695 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HIST3H3Q16695 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
HIST3H3Q16695 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HIST3H3Q16695 AL355472.2-201ENST00000422958 438 ntBASIC17.89■□□□□ 0.45
HIST3H3Q16695 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HIST3H3Q16695 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
HIST3H3Q16695 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HIST3H3Q16695 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.89■□□□□ 0.45
HIST3H3Q16695 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HIST3H3Q16695 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HIST3H3Q16695 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
HIST3H3Q16695 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
HIST3H3Q16695 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HIST3H3Q16695 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.89■□□□□ 0.45
HIST3H3Q16695 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HIST3H3Q16695 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HIST3H3Q16695 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
HIST3H3Q16695 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HIST3H3Q16695 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.88■□□□□ 0.45
HIST3H3Q16695 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HIST3H3Q16695 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.88■□□□□ 0.45
HIST3H3Q16695 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HIST3H3Q16695 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HIST3H3Q16695 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HIST3H3Q16695 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.88■□□□□ 0.45
HIST3H3Q16695 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HIST3H3Q16695 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HIST3H3Q16695 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.88■□□□□ 0.45
HIST3H3Q16695 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms