Protein–RNA interactions for Protein: Q00653

NFKB2, Nuclear factor NF-kappa-B p100 subunit, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB2Q00653 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NFKB2Q00653 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NFKB2Q00653 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
NFKB2Q00653 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NFKB2Q00653 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NFKB2Q00653 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NFKB2Q00653 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
NFKB2Q00653 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NFKB2Q00653 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.05■□□□□ 0.8
NFKB2Q00653 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NFKB2Q00653 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NFKB2Q00653 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
NFKB2Q00653 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NFKB2Q00653 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
NFKB2Q00653 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NFKB2Q00653 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NFKB2Q00653 KRT18P29-201ENST00000397031 1267 ntBASIC20.05■□□□□ 0.8
NFKB2Q00653 AC007322.1-201ENST00000426983 750 ntBASIC20.05■□□□□ 0.8
NFKB2Q00653 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NFKB2Q00653 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.05■□□□□ 0.8
NFKB2Q00653 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
NFKB2Q00653 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.05■□□□□ 0.8
NFKB2Q00653 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
NFKB2Q00653 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NFKB2Q00653 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NFKB2Q00653 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
NFKB2Q00653 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.05■□□□□ 0.8
NFKB2Q00653 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NFKB2Q00653 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
NFKB2Q00653 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
NFKB2Q00653 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NFKB2Q00653 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
NFKB2Q00653 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NFKB2Q00653 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NFKB2Q00653 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NFKB2Q00653 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NFKB2Q00653 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NFKB2Q00653 POU5F1P3-201ENST00000428824 1078 ntBASIC20.04■□□□□ 0.8
NFKB2Q00653 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.04■□□□□ 0.8
NFKB2Q00653 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.04■□□□□ 0.8
NFKB2Q00653 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.04■□□□□ 0.8
NFKB2Q00653 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.04■□□□□ 0.8
NFKB2Q00653 MIR2861-201ENST00000636310 90 ntBASIC20.04■□□□□ 0.8
NFKB2Q00653 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NFKB2Q00653 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NFKB2Q00653 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.04■□□□□ 0.8
NFKB2Q00653 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NFKB2Q00653 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NFKB2Q00653 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.03■□□□□ 0.8
NFKB2Q00653 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NFKB2Q00653 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NFKB2Q00653 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NFKB2Q00653 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NFKB2Q00653 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.03■□□□□ 0.8
NFKB2Q00653 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.03■□□□□ 0.8
NFKB2Q00653 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NFKB2Q00653 RPS2P52-201ENST00000469610 820 ntBASIC20.03■□□□□ 0.8
NFKB2Q00653 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
NFKB2Q00653 KRT18P20-201ENST00000548986 1279 ntBASIC20.03■□□□□ 0.8
NFKB2Q00653 AC231657.2-201ENST00000624556 255 ntBASIC20.03■□□□□ 0.8
NFKB2Q00653 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
NFKB2Q00653 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.03■□□□□ 0.8
NFKB2Q00653 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.03■□□□□ 0.8
NFKB2Q00653 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NFKB2Q00653 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NFKB2Q00653 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NFKB2Q00653 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NFKB2Q00653 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
NFKB2Q00653 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NFKB2Q00653 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.03■□□□□ 0.8
NFKB2Q00653 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
NFKB2Q00653 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.02■□□□□ 0.8
NFKB2Q00653 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
NFKB2Q00653 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
NFKB2Q00653 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.02■□□□□ 0.8
NFKB2Q00653 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NFKB2Q00653 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NFKB2Q00653 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.02■□□□□ 0.8
NFKB2Q00653 PRORSD1P-201ENST00000295112 541 ntBASIC20.02■□□□□ 0.8
NFKB2Q00653 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NFKB2Q00653 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NFKB2Q00653 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.02■□□□□ 0.8
NFKB2Q00653 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NFKB2Q00653 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
NFKB2Q00653 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.02■□□□□ 0.8
NFKB2Q00653 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.02■□□□□ 0.8
NFKB2Q00653 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.02■□□□□ 0.8
NFKB2Q00653 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
NFKB2Q00653 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
NFKB2Q00653 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NFKB2Q00653 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NFKB2Q00653 AL391422.3-201ENST00000603791 2761 ntBASIC20.02■□□□□ 0.8
NFKB2Q00653 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NFKB2Q00653 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
NFKB2Q00653 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
NFKB2Q00653 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
NFKB2Q00653 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.02■□□□□ 0.79
NFKB2Q00653 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NFKB2Q00653 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
NFKB2Q00653 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms