Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SPCS3P61009 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
SPCS3P61009 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SPCS3P61009 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
SPCS3P61009 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC16.43■□□□□ 0.22
SPCS3P61009 AC012414.1-201ENST00000556676 535 ntBASIC16.43■□□□□ 0.22
SPCS3P61009 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SPCS3P61009 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
SPCS3P61009 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
SPCS3P61009 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC16.43■□□□□ 0.22
SPCS3P61009 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SPCS3P61009 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SPCS3P61009 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
SPCS3P61009 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC16.43■□□□□ 0.22
SPCS3P61009 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
SPCS3P61009 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SPCS3P61009 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
SPCS3P61009 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SPCS3P61009 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC16.42■□□□□ 0.22
SPCS3P61009 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC16.42■□□□□ 0.22
SPCS3P61009 AP001330.3-201ENST00000520123 633 ntBASIC16.42■□□□□ 0.22
SPCS3P61009 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC16.42■□□□□ 0.22
SPCS3P61009 MAG-206ENST00000597035 542 ntTSL 4 BASIC16.42■□□□□ 0.22
SPCS3P61009 AC106739.1-201ENST00000617035 715 ntBASIC16.42■□□□□ 0.22
SPCS3P61009 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SPCS3P61009 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC16.42■□□□□ 0.22
SPCS3P61009 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
SPCS3P61009 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
SPCS3P61009 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
SPCS3P61009 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SPCS3P61009 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC16.42■□□□□ 0.22
SPCS3P61009 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SPCS3P61009 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
SPCS3P61009 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SPCS3P61009 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SPCS3P61009 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SPCS3P61009 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SPCS3P61009 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC16.42■□□□□ 0.22
SPCS3P61009 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.42■□□□□ 0.22
SPCS3P61009 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SPCS3P61009 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SPCS3P61009 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SPCS3P61009 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SPCS3P61009 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SPCS3P61009 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SPCS3P61009 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SPCS3P61009 EBPL-204ENST00000378272 766 ntTSL 3 BASIC16.41■□□□□ 0.22
SPCS3P61009 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC16.41■□□□□ 0.22
SPCS3P61009 AC245052.3-201ENST00000450182 901 ntBASIC16.41■□□□□ 0.22
SPCS3P61009 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC16.41■□□□□ 0.22
SPCS3P61009 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC16.41■□□□□ 0.22
SPCS3P61009 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC16.41■□□□□ 0.22
SPCS3P61009 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC16.41■□□□□ 0.22
SPCS3P61009 AL355001.2-201ENST00000620617 1191 ntBASIC16.41■□□□□ 0.22
SPCS3P61009 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SPCS3P61009 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SPCS3P61009 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
SPCS3P61009 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC16.41■□□□□ 0.22
SPCS3P61009 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SPCS3P61009 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC16.41■□□□□ 0.22
SPCS3P61009 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SPCS3P61009 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SPCS3P61009 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC16.41■□□□□ 0.22
SPCS3P61009 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SPCS3P61009 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC16.41■□□□□ 0.22
SPCS3P61009 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SPCS3P61009 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SPCS3P61009 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SPCS3P61009 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
SPCS3P61009 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SPCS3P61009 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPCS3P61009 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPCS3P61009 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SPCS3P61009 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SPCS3P61009 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SPCS3P61009 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC16.4■□□□□ 0.22
SPCS3P61009 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
SPCS3P61009 AC096631.2-201ENST00000436136 790 ntBASIC16.4■□□□□ 0.22
SPCS3P61009 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC16.4■□□□□ 0.22
SPCS3P61009 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SPCS3P61009 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC16.4■□□□□ 0.22
SPCS3P61009 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPCS3P61009 AL354811.1-201ENST00000610286 706 ntBASIC16.4■□□□□ 0.22
SPCS3P61009 AC120498.10-201ENST00000621827 505 ntBASIC16.4■□□□□ 0.22
SPCS3P61009 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPCS3P61009 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SPCS3P61009 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SPCS3P61009 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SPCS3P61009 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC16.4■□□□□ 0.22
SPCS3P61009 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPCS3P61009 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC16.39■□□□□ 0.22
SPCS3P61009 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.39■□□□□ 0.22
SPCS3P61009 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPCS3P61009 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SPCS3P61009 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SPCS3P61009 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPCS3P61009 KRT16P2-201ENST00000414673 1423 ntBASIC16.39■□□□□ 0.21
SPCS3P61009 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SPCS3P61009 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPCS3P61009 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms