Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.1■□□□□ 0.49
CLRN1P58418 AC016405.3-201ENST00000607710 860 ntBASIC18.1■□□□□ 0.49
CLRN1P58418 AC231657.2-201ENST00000624556 255 ntBASIC18.1■□□□□ 0.49
CLRN1P58418 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLRN1P58418 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.1■□□□□ 0.49
CLRN1P58418 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLRN1P58418 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLRN1P58418 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.09■□□□□ 0.49
CLRN1P58418 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
CLRN1P58418 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.09■□□□□ 0.49
CLRN1P58418 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.09■□□□□ 0.49
CLRN1P58418 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
CLRN1P58418 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLRN1P58418 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLRN1P58418 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLRN1P58418 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLRN1P58418 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.09■□□□□ 0.49
CLRN1P58418 AC007322.1-201ENST00000426983 750 ntBASIC18.09■□□□□ 0.49
CLRN1P58418 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLRN1P58418 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.09■□□□□ 0.49
CLRN1P58418 CNN2P6-201ENST00000439038 900 ntBASIC18.09■□□□□ 0.49
CLRN1P58418 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLRN1P58418 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.09■□□□□ 0.49
CLRN1P58418 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.09■□□□□ 0.49
CLRN1P58418 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.09■□□□□ 0.49
CLRN1P58418 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.09■□□□□ 0.49
CLRN1P58418 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.09■□□□□ 0.49
CLRN1P58418 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.09■□□□□ 0.49
CLRN1P58418 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CLRN1P58418 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLRN1P58418 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLRN1P58418 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLRN1P58418 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLRN1P58418 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.09■□□□□ 0.49
CLRN1P58418 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLRN1P58418 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLRN1P58418 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CLRN1P58418 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLRN1P58418 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
CLRN1P58418 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
CLRN1P58418 KRT8P36-201ENST00000489121 1440 ntBASIC18.08■□□□□ 0.49
CLRN1P58418 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.08■□□□□ 0.49
CLRN1P58418 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CLRN1P58418 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.08■□□□□ 0.49
CLRN1P58418 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CLRN1P58418 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLRN1P58418 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.08■□□□□ 0.48
CLRN1P58418 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLRN1P58418 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CLRN1P58418 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.08■□□□□ 0.48
CLRN1P58418 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.08■□□□□ 0.48
CLRN1P58418 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLRN1P58418 AC069236.1-201ENST00000604339 616 ntBASIC18.08■□□□□ 0.48
CLRN1P58418 AC008694.1-202ENST00000636953 945 ntBASIC18.08■□□□□ 0.48
CLRN1P58418 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CLRN1P58418 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLRN1P58418 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.08■□□□□ 0.48
CLRN1P58418 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CLRN1P58418 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLRN1P58418 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CLRN1P58418 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLRN1P58418 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLRN1P58418 AC068338.2-201ENST00000563278 1430 ntBASIC18.07■□□□□ 0.48
CLRN1P58418 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLRN1P58418 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CLRN1P58418 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLRN1P58418 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLRN1P58418 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLRN1P58418 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.07■□□□□ 0.48
CLRN1P58418 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLRN1P58418 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLRN1P58418 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
CLRN1P58418 AL137784.2-201ENST00000607332 1000 ntBASIC18.07■□□□□ 0.48
CLRN1P58418 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLRN1P58418 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLRN1P58418 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLRN1P58418 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLRN1P58418 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.07■□□□□ 0.48
CLRN1P58418 AC087633.2-202ENST00000565166 1439 ntBASIC18.06■□□□□ 0.48
CLRN1P58418 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLRN1P58418 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLRN1P58418 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLRN1P58418 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLRN1P58418 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLRN1P58418 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CLRN1P58418 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.06■□□□□ 0.48
CLRN1P58418 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLRN1P58418 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLRN1P58418 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLRN1P58418 RARRES2P4-201ENST00000514074 484 ntBASIC18.06■□□□□ 0.48
CLRN1P58418 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.06■□□□□ 0.48
CLRN1P58418 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.06■□□□□ 0.48
CLRN1P58418 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CLRN1P58418 AL356652.1-201ENST00000615962 565 ntBASIC18.06■□□□□ 0.48
CLRN1P58418 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
CLRN1P58418 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
CLRN1P58418 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.06■□□□□ 0.48
CLRN1P58418 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLRN1P58418 CYP21A1P-202ENST00000354927 1481 ntBASIC18.06■□□□□ 0.48
CLRN1P58418 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms