Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RAB38P57729 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RAB38P57729 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RAB38P57729 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RAB38P57729 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RAB38P57729 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RAB38P57729 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RAB38P57729 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.07■□□□□ 0.64
RAB38P57729 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RAB38P57729 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.07■□□□□ 0.64
RAB38P57729 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.07■□□□□ 0.64
RAB38P57729 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.07■□□□□ 0.64
RAB38P57729 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.07■□□□□ 0.64
RAB38P57729 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
RAB38P57729 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
RAB38P57729 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.07■□□□□ 0.64
RAB38P57729 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RAB38P57729 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RAB38P57729 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RAB38P57729 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
RAB38P57729 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RAB38P57729 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.07■□□□□ 0.64
RAB38P57729 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RAB38P57729 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAB38P57729 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.06■□□□□ 0.64
RAB38P57729 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAB38P57729 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAB38P57729 AC020907.5-201ENST00000624372 1936 ntBASIC19.06■□□□□ 0.64
RAB38P57729 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAB38P57729 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
RAB38P57729 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RAB38P57729 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAB38P57729 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAB38P57729 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAB38P57729 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
RAB38P57729 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.06■□□□□ 0.64
RAB38P57729 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.06■□□□□ 0.64
RAB38P57729 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAB38P57729 AC073314.1-201ENST00000568729 2216 ntBASIC19.06■□□□□ 0.64
RAB38P57729 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.06■□□□□ 0.64
RAB38P57729 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
RAB38P57729 AP005212.1-201ENST00000581547 1997 ntBASIC19.06■□□□□ 0.64
RAB38P57729 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
RAB38P57729 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RAB38P57729 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAB38P57729 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RAB38P57729 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
RAB38P57729 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
RAB38P57729 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.05■□□□□ 0.64
RAB38P57729 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RAB38P57729 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.05■□□□□ 0.64
RAB38P57729 AC083880.1-201ENST00000608266 535 ntBASIC19.05■□□□□ 0.64
RAB38P57729 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
RAB38P57729 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAB38P57729 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAB38P57729 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAB38P57729 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RAB38P57729 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.05■□□□□ 0.64
RAB38P57729 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB38P57729 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB38P57729 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RAB38P57729 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.04■□□□□ 0.64
RAB38P57729 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
RAB38P57729 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.04■□□□□ 0.64
RAB38P57729 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB38P57729 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.04■□□□□ 0.64
RAB38P57729 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB38P57729 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.04■□□□□ 0.64
RAB38P57729 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.04■□□□□ 0.64
RAB38P57729 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.04■□□□□ 0.64
RAB38P57729 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
RAB38P57729 GABARAPL3-202ENST00000624044 1851 ntBASIC19.04■□□□□ 0.64
RAB38P57729 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB38P57729 DPP3P2-201ENST00000416030 1696 ntBASIC19.04■□□□□ 0.64
RAB38P57729 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB38P57729 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
RAB38P57729 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAB38P57729 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
RAB38P57729 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RAB38P57729 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.03■□□□□ 0.64
RAB38P57729 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAB38P57729 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAB38P57729 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAB38P57729 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAB38P57729 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAB38P57729 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
RAB38P57729 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.03■□□□□ 0.64
RAB38P57729 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.03■□□□□ 0.64
RAB38P57729 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.03■□□□□ 0.64
RAB38P57729 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAB38P57729 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAB38P57729 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.03■□□□□ 0.64
RAB38P57729 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAB38P57729 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAB38P57729 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAB38P57729 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
RAB38P57729 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAB38P57729 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.02■□□□□ 0.64
RAB38P57729 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
RAB38P57729 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms