Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN20P56880 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN20P56880 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
CLDN20P56880 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.55■□□□□ 0.56
CLDN20P56880 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN20P56880 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN20P56880 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CLDN20P56880 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN20P56880 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN20P56880 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN20P56880 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.54■□□□□ 0.56
CLDN20P56880 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
CLDN20P56880 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.54■□□□□ 0.56
CLDN20P56880 AL138781.1-201ENST00000566567 1274 ntBASIC18.54■□□□□ 0.56
CLDN20P56880 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.54■□□□□ 0.56
CLDN20P56880 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN20P56880 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.54■□□□□ 0.56
CLDN20P56880 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CLDN20P56880 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
CLDN20P56880 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN20P56880 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN20P56880 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN20P56880 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.53■□□□□ 0.56
CLDN20P56880 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN20P56880 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN20P56880 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.53■□□□□ 0.56
CLDN20P56880 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.53■□□□□ 0.56
CLDN20P56880 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.53■□□□□ 0.56
CLDN20P56880 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.53■□□□□ 0.56
CLDN20P56880 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.53■□□□□ 0.56
CLDN20P56880 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN20P56880 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN20P56880 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN20P56880 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CLDN20P56880 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN20P56880 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.53■□□□□ 0.56
CLDN20P56880 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN20P56880 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.52■□□□□ 0.56
CLDN20P56880 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN20P56880 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.52■□□□□ 0.56
CLDN20P56880 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN20P56880 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.52■□□□□ 0.56
CLDN20P56880 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN20P56880 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.52■□□□□ 0.56
CLDN20P56880 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CLDN20P56880 MIPEPP3-201ENST00000412105 444 ntBASIC18.52■□□□□ 0.56
CLDN20P56880 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.52■□□□□ 0.56
CLDN20P56880 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.52■□□□□ 0.56
CLDN20P56880 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN20P56880 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.52■□□□□ 0.56
CLDN20P56880 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.52■□□□□ 0.56
CLDN20P56880 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN20P56880 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN20P56880 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CLDN20P56880 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN20P56880 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.52■□□□□ 0.55
CLDN20P56880 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CLDN20P56880 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CLDN20P56880 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
CLDN20P56880 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN20P56880 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN20P56880 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.51■□□□□ 0.55
CLDN20P56880 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CLDN20P56880 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CLDN20P56880 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
CLDN20P56880 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CLDN20P56880 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.51■□□□□ 0.55
CLDN20P56880 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.51■□□□□ 0.55
CLDN20P56880 AC142086.2-201ENST00000569753 217 ntBASIC18.51■□□□□ 0.55
CLDN20P56880 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.51■□□□□ 0.55
CLDN20P56880 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CLDN20P56880 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.51■□□□□ 0.55
CLDN20P56880 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.51■□□□□ 0.55
CLDN20P56880 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN20P56880 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CLDN20P56880 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN20P56880 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN20P56880 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN20P56880 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN20P56880 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN20P56880 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN20P56880 AL020996.1-203ENST00000536896 2307 ntBASIC18.5■□□□□ 0.55
CLDN20P56880 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.5■□□□□ 0.55
CLDN20P56880 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN20P56880 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN20P56880 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.5■□□□□ 0.55
CLDN20P56880 BX276092.2-201ENST00000417668 665 ntBASIC18.5■□□□□ 0.55
CLDN20P56880 AL355472.2-201ENST00000422958 438 ntBASIC18.5■□□□□ 0.55
CLDN20P56880 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.5■□□□□ 0.55
CLDN20P56880 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.5■□□□□ 0.55
CLDN20P56880 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.5■□□□□ 0.55
CLDN20P56880 AC098934.4-201ENST00000564127 592 ntBASIC18.5■□□□□ 0.55
CLDN20P56880 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.5■□□□□ 0.55
CLDN20P56880 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.5■□□□□ 0.55
CLDN20P56880 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
CLDN20P56880 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN20P56880 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN20P56880 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN20P56880 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN20P56880 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms