Protein–RNA interactions for Protein: P55769

SNU13, NHP2-like protein 1, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13P55769 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNU13P55769 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SNU13P55769 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC17.43■□□□□ 0.38
SNU13P55769 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC17.43■□□□□ 0.38
SNU13P55769 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.43■□□□□ 0.38
SNU13P55769 RARRES2P11-201ENST00000635158 484 ntBASIC17.43■□□□□ 0.38
SNU13P55769 KRT16P2-201ENST00000414673 1423 ntBASIC17.43■□□□□ 0.38
SNU13P55769 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNU13P55769 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.43■□□□□ 0.38
SNU13P55769 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNU13P55769 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.42■□□□□ 0.38
SNU13P55769 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.42■□□□□ 0.38
SNU13P55769 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SNU13P55769 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.42■□□□□ 0.38
SNU13P55769 AL512408.1-201ENST00000569378 2000 ntBASIC17.42■□□□□ 0.38
SNU13P55769 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.42■□□□□ 0.38
SNU13P55769 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNU13P55769 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SNU13P55769 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.42■□□□□ 0.38
SNU13P55769 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNU13P55769 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNU13P55769 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNU13P55769 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.42■□□□□ 0.38
SNU13P55769 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC17.42■□□□□ 0.38
SNU13P55769 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC17.42■□□□□ 0.38
SNU13P55769 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNU13P55769 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.42■□□□□ 0.38
SNU13P55769 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.42■□□□□ 0.38
SNU13P55769 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNU13P55769 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNU13P55769 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
SNU13P55769 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.42■□□□□ 0.38
SNU13P55769 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNU13P55769 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SNU13P55769 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SNU13P55769 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.41■□□□□ 0.38
SNU13P55769 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SNU13P55769 AL162377.1-201ENST00000618844 1793 ntBASIC17.41■□□□□ 0.38
SNU13P55769 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNU13P55769 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SNU13P55769 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SNU13P55769 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC17.41■□□□□ 0.38
SNU13P55769 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.41■□□□□ 0.38
SNU13P55769 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNU13P55769 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNU13P55769 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.41■□□□□ 0.38
SNU13P55769 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
SNU13P55769 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNU13P55769 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNU13P55769 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SNU13P55769 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.41■□□□□ 0.38
SNU13P55769 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNU13P55769 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.4■□□□□ 0.38
SNU13P55769 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.4■□□□□ 0.38
SNU13P55769 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
SNU13P55769 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNU13P55769 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.4■□□□□ 0.38
SNU13P55769 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNU13P55769 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.4■□□□□ 0.38
SNU13P55769 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SNU13P55769 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SNU13P55769 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNU13P55769 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SNU13P55769 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNU13P55769 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNU13P55769 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNU13P55769 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNU13P55769 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNU13P55769 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SNU13P55769 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.4■□□□□ 0.38
SNU13P55769 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.4■□□□□ 0.38
SNU13P55769 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC17.4■□□□□ 0.38
SNU13P55769 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
SNU13P55769 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.4■□□□□ 0.38
SNU13P55769 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNU13P55769 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.4■□□□□ 0.38
SNU13P55769 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNU13P55769 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SNU13P55769 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SNU13P55769 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.4■□□□□ 0.38
SNU13P55769 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNU13P55769 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNU13P55769 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNU13P55769 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.4■□□□□ 0.38
SNU13P55769 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNU13P55769 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.39■□□□□ 0.37
SNU13P55769 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.39■□□□□ 0.37
SNU13P55769 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNU13P55769 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SNU13P55769 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.39■□□□□ 0.37
SNU13P55769 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SNU13P55769 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.39■□□□□ 0.37
SNU13P55769 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNU13P55769 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SNU13P55769 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.39■□□□□ 0.37
SNU13P55769 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SNU13P55769 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.39■□□□□ 0.37
SNU13P55769 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SNU13P55769 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNU13P55769 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms