Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NR1H2P55055 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NR1H2P55055 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.13■□□□□ 0.65
NR1H2P55055 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NR1H2P55055 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.13■□□□□ 0.65
NR1H2P55055 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.13■□□□□ 0.65
NR1H2P55055 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.13■□□□□ 0.65
NR1H2P55055 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NR1H2P55055 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
NR1H2P55055 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
NR1H2P55055 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NR1H2P55055 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
NR1H2P55055 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
NR1H2P55055 NEFHP1-201ENST00000412845 2629 ntBASIC19.12■□□□□ 0.65
NR1H2P55055 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
NR1H2P55055 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NR1H2P55055 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
NR1H2P55055 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NR1H2P55055 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
NR1H2P55055 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NR1H2P55055 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.12■□□□□ 0.65
NR1H2P55055 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.12■□□□□ 0.65
NR1H2P55055 LINC02228-203ENST00000641970 1355 ntBASIC19.12■□□□□ 0.65
NR1H2P55055 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.12■□□□□ 0.65
NR1H2P55055 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.12■□□□□ 0.65
NR1H2P55055 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NR1H2P55055 MIR6084-201ENST00000622012 110 ntBASIC19.12■□□□□ 0.65
NR1H2P55055 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
NR1H2P55055 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
NR1H2P55055 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
NR1H2P55055 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NR1H2P55055 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NR1H2P55055 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
NR1H2P55055 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NR1H2P55055 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
NR1H2P55055 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NR1H2P55055 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
NR1H2P55055 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
NR1H2P55055 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NR1H2P55055 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NR1H2P55055 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NR1H2P55055 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
NR1H2P55055 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
NR1H2P55055 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NR1H2P55055 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NR1H2P55055 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NR1H2P55055 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.11■□□□□ 0.65
NR1H2P55055 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.11■□□□□ 0.65
NR1H2P55055 IKBKGP1-201ENST00000612193 1073 ntBASIC19.11■□□□□ 0.65
NR1H2P55055 AC068587.7-201ENST00000641602 218 ntBASIC19.11■□□□□ 0.65
NR1H2P55055 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.11■□□□□ 0.65
NR1H2P55055 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
NR1H2P55055 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.11■□□□□ 0.65
NR1H2P55055 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
NR1H2P55055 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
NR1H2P55055 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
NR1H2P55055 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NR1H2P55055 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
NR1H2P55055 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NR1H2P55055 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NR1H2P55055 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.1■□□□□ 0.65
NR1H2P55055 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.1■□□□□ 0.65
NR1H2P55055 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
NR1H2P55055 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NR1H2P55055 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.1■□□□□ 0.65
NR1H2P55055 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.1■□□□□ 0.65
NR1H2P55055 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NR1H2P55055 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.1■□□□□ 0.65
NR1H2P55055 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NR1H2P55055 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NR1H2P55055 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NR1H2P55055 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NR1H2P55055 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.1■□□□□ 0.65
NR1H2P55055 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NR1H2P55055 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NR1H2P55055 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NR1H2P55055 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.09■□□□□ 0.65
NR1H2P55055 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.09■□□□□ 0.65
NR1H2P55055 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
NR1H2P55055 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NR1H2P55055 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.09■□□□□ 0.65
NR1H2P55055 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NR1H2P55055 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NR1H2P55055 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.09■□□□□ 0.65
NR1H2P55055 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NR1H2P55055 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NR1H2P55055 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.09■□□□□ 0.65
NR1H2P55055 KRT18P5-201ENST00000436075 1291 ntBASIC19.09■□□□□ 0.65
NR1H2P55055 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NR1H2P55055 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.09■□□□□ 0.65
NR1H2P55055 DUX4L2-201ENST00000561772 1275 ntBASIC19.09■□□□□ 0.65
NR1H2P55055 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.09■□□□□ 0.65
NR1H2P55055 DUX4L6-201ENST00000626483 1275 ntBASIC19.09■□□□□ 0.65
NR1H2P55055 DUX4L1-201ENST00000627662 1275 ntBASIC19.09■□□□□ 0.65
NR1H2P55055 DUX4L8-201ENST00000629013 1275 ntBASIC19.09■□□□□ 0.65
NR1H2P55055 DUX4L3-201ENST00000630187 1275 ntBASIC19.09■□□□□ 0.65
NR1H2P55055 DUX4L7-201ENST00000630678 1275 ntBASIC19.09■□□□□ 0.65
NR1H2P55055 DUX4L5-201ENST00000630834 1275 ntBASIC19.09■□□□□ 0.65
NR1H2P55055 AC105233.4-201ENST00000642045 216 ntBASIC19.09■□□□□ 0.65
NR1H2P55055 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms