Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.25■□□□□ 0.99
EPHB3P54753 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
EPHB3P54753 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
EPHB3P54753 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
EPHB3P54753 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.25■□□□□ 0.99
EPHB3P54753 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.25■□□□□ 0.99
EPHB3P54753 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
EPHB3P54753 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.25■□□□□ 0.99
EPHB3P54753 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
EPHB3P54753 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.25■□□□□ 0.99
EPHB3P54753 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.25■□□□□ 0.99
EPHB3P54753 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.25■□□□□ 0.99
EPHB3P54753 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
EPHB3P54753 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.25■□□□□ 0.99
EPHB3P54753 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
EPHB3P54753 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
EPHB3P54753 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
EPHB3P54753 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
EPHB3P54753 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
EPHB3P54753 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.25■□□□□ 0.99
EPHB3P54753 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.25■□□□□ 0.99
EPHB3P54753 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
EPHB3P54753 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.24■□□□□ 0.99
EPHB3P54753 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.24■□□□□ 0.99
EPHB3P54753 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
EPHB3P54753 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
EPHB3P54753 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.24■□□□□ 0.99
EPHB3P54753 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
EPHB3P54753 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.24■□□□□ 0.99
EPHB3P54753 AC133681.1-201ENST00000465482 601 ntBASIC21.24■□□□□ 0.99
EPHB3P54753 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.24■□□□□ 0.99
EPHB3P54753 AC023632.3-201ENST00000521633 145 ntBASIC21.24■□□□□ 0.99
EPHB3P54753 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.24■□□□□ 0.99
EPHB3P54753 ARL16-209ENST00000573715 763 ntTSL 3 BASIC21.24■□□□□ 0.99
EPHB3P54753 ARL16-211ENST00000576135 694 ntTSL 3 BASIC21.24■□□□□ 0.99
EPHB3P54753 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.24■□□□□ 0.99
EPHB3P54753 Z99916.2-201ENST00000604037 246 ntBASIC21.24■□□□□ 0.99
EPHB3P54753 AC124016.1-201ENST00000609552 612 ntBASIC21.24■□□□□ 0.99
EPHB3P54753 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
EPHB3P54753 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
EPHB3P54753 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
EPHB3P54753 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
EPHB3P54753 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
EPHB3P54753 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
EPHB3P54753 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
EPHB3P54753 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
EPHB3P54753 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.23■□□□□ 0.99
EPHB3P54753 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
EPHB3P54753 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
EPHB3P54753 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
EPHB3P54753 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
EPHB3P54753 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.23■□□□□ 0.99
EPHB3P54753 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.23■□□□□ 0.99
EPHB3P54753 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21.23■□□□□ 0.99
EPHB3P54753 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
EPHB3P54753 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.23■□□□□ 0.99
EPHB3P54753 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
EPHB3P54753 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
EPHB3P54753 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
EPHB3P54753 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
EPHB3P54753 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.22■□□□□ 0.99
EPHB3P54753 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
EPHB3P54753 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
EPHB3P54753 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
EPHB3P54753 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
EPHB3P54753 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.22■□□□□ 0.99
EPHB3P54753 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
EPHB3P54753 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.22■□□□□ 0.99
EPHB3P54753 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
EPHB3P54753 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
EPHB3P54753 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
EPHB3P54753 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
EPHB3P54753 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
EPHB3P54753 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
EPHB3P54753 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
EPHB3P54753 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
EPHB3P54753 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
EPHB3P54753 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
EPHB3P54753 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
EPHB3P54753 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC21.21■□□□□ 0.99
EPHB3P54753 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
EPHB3P54753 KRASP1-201ENST00000407852 552 ntBASIC21.21■□□□□ 0.99
EPHB3P54753 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.21■□□□□ 0.99
EPHB3P54753 PRKY-204ENST00000533551 1019 ntBASIC21.21■□□□□ 0.99
EPHB3P54753 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.21■□□□□ 0.99
EPHB3P54753 MIR4497-201ENST00000583208 89 ntBASIC21.21■□□□□ 0.99
EPHB3P54753 AC110285.5-201ENST00000611501 352 ntBASIC21.21■□□□□ 0.99
EPHB3P54753 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
EPHB3P54753 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.21■□□□□ 0.99
EPHB3P54753 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
EPHB3P54753 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.21■□□□□ 0.99
EPHB3P54753 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
EPHB3P54753 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
EPHB3P54753 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
EPHB3P54753 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.2■□□□□ 0.98
EPHB3P54753 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.2■□□□□ 0.98
EPHB3P54753 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
EPHB3P54753 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.2■□□□□ 0.98
EPHB3P54753 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.2■□□□□ 0.98
EPHB3P54753 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms