Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 YPL238CYPL238C 390 nt1.55□□□□□ -2.16
YNL040WP53960 SLM6YBR266C 453 nt1.55□□□□□ -2.16
YNL040WP53960 SPC110YDR356W 2835 nt1.55□□□□□ -2.16
YNL040WP53960 TFC8YPL007C 1767 nt1.54□□□□□ -2.16
YNL040WP53960 YER084W-AYER084W-A 513 nt1.54□□□□□ -2.16
YNL040WP53960 BIG1YHR101C 1008 nt1.54□□□□□ -2.16
YNL040WP53960 GAL7YBR018C 1101 nt1.54□□□□□ -2.16
YNL040WP53960 GPX2YBR244W 489 nt1.54□□□□□ -2.16
YNL040WP53960 POL5YEL055C 3069 nt1.54□□□□□ -2.16
YNL040WP53960 KAR3YPR141C 2190 nt1.54□□□□□ -2.16
YNL040WP53960 NUP192YJL039C 5052 nt1.54□□□□□ -2.16
YNL040WP53960 SHE9YDR393W 1371 nt1.53□□□□□ -2.16
YNL040WP53960 PPN1YDR452W 2025 nt1.53□□□□□ -2.16
YNL040WP53960 YEL030C-AYEL030C-A 315 nt1.53□□□□□ -2.16
YNL040WP53960 RPF1YHR088W 888 nt1.53□□□□□ -2.16
YNL040WP53960 HSK3YKL138C-A 210 nt1.53□□□□□ -2.16
YNL040WP53960 SEY1YOR165W 2331 nt1.53□□□□□ -2.16
YNL040WP53960 SWT1YOR166C 1377 nt1.53□□□□□ -2.16
YNL040WP53960 CDC31YOR257W 486 nt1.53□□□□□ -2.16
YNL040WP53960 IRE1YHR079C 3348 nt1.53□□□□□ -2.17
YNL040WP53960 SGD1YLR336C 2700 nt1.53□□□□□ -2.17
YNL040WP53960 YBR012W-AYBR012W-A 1323 nt1.52□□□□□ -2.17
YNL040WP53960 YOR142W-AYOR142W-A 1323 nt1.52□□□□□ -2.17
YNL040WP53960 YPR158W-AYPR158W-A 1323 nt1.52□□□□□ -2.17
YNL040WP53960 snR79snR79 84 nt1.52□□□□□ -2.17
YNL040WP53960 YLR456WYLR456W 615 nt1.52□□□□□ -2.17
YNL040WP53960 ATP19YOL077W-A 207 nt1.52□□□□□ -2.17
YNL040WP53960 YOR248WYOR248W 303 nt1.52□□□□□ -2.17
YNL040WP53960 PET127YOR017W 2403 nt1.52□□□□□ -2.17
YNL040WP53960 YJR039WYJR039W 3366 nt1.51□□□□□ -2.17
YNL040WP53960 GNT1YOR320C 1476 nt1.51□□□□□ -2.17
YNL040WP53960 SMY1YKL079W 1971 nt1.51□□□□□ -2.17
YNL040WP53960 ZRG8YER033C 3231 nt1.51□□□□□ -2.17
YNL040WP53960 YHR130CYHR130C 336 nt1.51□□□□□ -2.17
YNL040WP53960 YLR202CYLR202C 327 nt1.51□□□□□ -2.17
YNL040WP53960 PGA1YNL158W 597 nt1.51□□□□□ -2.17
YNL040WP53960 NOT5YPR072W 1683 nt1.51□□□□□ -2.17
YNL040WP53960 MXR1YER042W 555 nt1.5□□□□□ -2.17
YNL040WP53960 IES5YER092W 378 nt1.5□□□□□ -2.17
YNL040WP53960 YML108WYML108W 318 nt1.5□□□□□ -2.17
YNL040WP53960 PET123YOR158W 957 nt1.5□□□□□ -2.17
YNL040WP53960 YPL068CYPL068C 882 nt1.5□□□□□ -2.17
YNL040WP53960 YPR039WYPR039W 336 nt1.5□□□□□ -2.17
YNL040WP53960 PLC1YPL268W 2610 nt1.49□□□□□ -2.17
YNL040WP53960 YHR139C-AYHR139C-A 312 nt1.49□□□□□ -2.17
YNL040WP53960 AIM29YKR074W 468 nt1.49□□□□□ -2.17
YNL040WP53960 YLR269CYLR269C 351 nt1.49□□□□□ -2.17
YNL040WP53960 EGD1YPL037C 474 nt1.49□□□□□ -2.17
YNL040WP53960 TSC3YBR058C-A 243 nt1.49□□□□□ -2.17
YNL040WP53960 SAR1YPL218W 573 nt1.49□□□□□ -2.17
YNL040WP53960 YBR224WYBR224W 516 nt1.49□□□□□ -2.17
YNL040WP53960 YLR149CYLR149C 2193 nt1.48□□□□□ -2.17
YNL040WP53960 CCH1YGR217W 6120 nt1.48□□□□□ -2.17
YNL040WP53960 BI2Q0110 1272 nt1.48□□□□□ -2.17
YNL040WP53960 TOM22YNL131W 459 nt1.48□□□□□ -2.17
YNL040WP53960 YPR146CYPR146C 330 nt1.48□□□□□ -2.17
YNL040WP53960 CDC24YAL041W 2565 nt1.48□□□□□ -2.17
YNL040WP53960 NOP53YPL146C 1368 nt1.47□□□□□ -2.17
YNL040WP53960 MSS11YMR164C 2277 nt1.47□□□□□ -2.17
YNL040WP53960 HKR1YDR420W 5409 nt1.47□□□□□ -2.17
YNL040WP53960 HMLALPHA2YCL067C 633 nt1.47□□□□□ -2.17
YNL040WP53960 YCR001WYCR001W 315 nt1.47□□□□□ -2.17
YNL040WP53960 MATALPHA2YCR039C 633 nt1.47□□□□□ -2.17
YNL040WP53960 HUR1YGL168W 333 nt1.47□□□□□ -2.17
YNL040WP53960 YGR025WYGR025W 303 nt1.47□□□□□ -2.17
YNL040WP53960 YHR214W-AYHR214W-A 486 nt1.47□□□□□ -2.17
YNL040WP53960 YAR068WYAR068W 486 nt1.47□□□□□ -2.17
YNL040WP53960 YBL083CYBL083C 426 nt1.47□□□□□ -2.17
YNL040WP53960 snR13snR13 124 nt1.47□□□□□ -2.17
YNL040WP53960 YGR109W-BYGR109W-B 4644 nt1.47□□□□□ -2.17
YNL040WP53960 FYV8YGR196C 2454 nt1.47□□□□□ -2.17
YNL040WP53960 DOT6YER088C 2013 nt1.47□□□□□ -2.17
YNL040WP53960 FRK1YPL141C 2598 nt1.47□□□□□ -2.17
YNL040WP53960 DAS1YJL149W 1992 nt1.47□□□□□ -2.17
YNL040WP53960 YOR192C-AYOR192C-A 1317 nt1.46□□□□□ -2.18
YNL040WP53960 SAC3YDR159W 3906 nt1.46□□□□□ -2.18
YNL040WP53960 YER121WYER121W 345 nt1.46□□□□□ -2.18
YNL040WP53960 YBR076C-AYBR076C-A 267 nt1.46□□□□□ -2.18
YNL040WP53960 COX1Q0045 1605 nt1.46□□□□□ -2.18
YNL040WP53960 ASM4YDL088C 1587 nt1.46□□□□□ -2.18
YNL040WP53960 PEP3YLR148W 2757 nt1.46□□□□□ -2.18
YNL040WP53960 YSW1YBR148W 1830 nt1.45□□□□□ -2.18
YNL040WP53960 TDA9YML081W 3756 nt1.45□□□□□ -2.18
YNL040WP53960 CHS1YNL192W 3396 nt1.45□□□□□ -2.18
YNL040WP53960 YLR171WYLR171W 390 nt1.45□□□□□ -2.18
YNL040WP53960 CDC33YOL139C 642 nt1.45□□□□□ -2.18
YNL040WP53960 NUP120YKL057C 3114 nt1.44□□□□□ -2.18
YNL040WP53960 YCR043CYCR043C 384 nt1.44□□□□□ -2.18
YNL040WP53960 CMC2YBL059C-A 330 nt1.44□□□□□ -2.18
YNL040WP53960 YBR121C-AYBR121C-A 159 nt1.44□□□□□ -2.18
YNL040WP53960 snR41snR41 95 nt1.44□□□□□ -2.18
YNL040WP53960 PIK1YNL267W 3201 nt1.44□□□□□ -2.18
YNL040WP53960 CTR9YOL145C 3234 nt1.44□□□□□ -2.18
YNL040WP53960 YGR250CYGR250C 2346 nt1.43□□□□□ -2.18
YNL040WP53960 YOR019WYOR019W 2193 nt1.43□□□□□ -2.18
YNL040WP53960 NBL1YHR199C-A 222 nt1.43□□□□□ -2.18
YNL040WP53960 TIF11YMR260C 462 nt1.43□□□□□ -2.18
YNL040WP53960 YBR184WYBR184W 1572 nt1.42□□□□□ -2.18
YNL040WP53960 YLR422WYLR422W 5799 nt1.42□□□□□ -2.18
YNL040WP53960 RVS161YCR009C 798 nt1.42□□□□□ -2.18
Retrieved 100 of 7,029 protein–RNA pairs in 65.2 ms