Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC005521.1-201ENST00000393351 872 ntBASIC20.09■□□□□ 0.81
LIMK1P53667 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.09■□□□□ 0.81
LIMK1P53667 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.09■□□□□ 0.81
LIMK1P53667 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.09■□□□□ 0.81
LIMK1P53667 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.09■□□□□ 0.81
LIMK1P53667 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.09■□□□□ 0.81
LIMK1P53667 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LIMK1P53667 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LIMK1P53667 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
LIMK1P53667 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.09■□□□□ 0.81
LIMK1P53667 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LIMK1P53667 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
LIMK1P53667 AC113347.1-201ENST00000413321 391 ntBASIC20.08■□□□□ 0.81
LIMK1P53667 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.08■□□□□ 0.81
LIMK1P53667 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.08■□□□□ 0.81
LIMK1P53667 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
LIMK1P53667 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.08■□□□□ 0.8
LIMK1P53667 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LIMK1P53667 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
LIMK1P53667 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LIMK1P53667 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LIMK1P53667 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LIMK1P53667 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LIMK1P53667 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LIMK1P53667 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.07■□□□□ 0.8
LIMK1P53667 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LIMK1P53667 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.07■□□□□ 0.8
LIMK1P53667 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.07■□□□□ 0.8
LIMK1P53667 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
LIMK1P53667 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.07■□□□□ 0.8
LIMK1P53667 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
LIMK1P53667 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LIMK1P53667 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LIMK1P53667 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LIMK1P53667 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LIMK1P53667 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.07■□□□□ 0.8
LIMK1P53667 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LIMK1P53667 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.07■□□□□ 0.8
LIMK1P53667 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.06■□□□□ 0.8
LIMK1P53667 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.06■□□□□ 0.8
LIMK1P53667 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LIMK1P53667 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LIMK1P53667 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LIMK1P53667 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
LIMK1P53667 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LIMK1P53667 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
LIMK1P53667 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.06■□□□□ 0.8
LIMK1P53667 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.06■□□□□ 0.8
LIMK1P53667 AL353807.1-201ENST00000427475 662 ntBASIC20.06■□□□□ 0.8
LIMK1P53667 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.06■□□□□ 0.8
LIMK1P53667 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.06■□□□□ 0.8
LIMK1P53667 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.06■□□□□ 0.8
LIMK1P53667 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.06■□□□□ 0.8
LIMK1P53667 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
LIMK1P53667 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.06■□□□□ 0.8
LIMK1P53667 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
LIMK1P53667 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LIMK1P53667 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LIMK1P53667 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
LIMK1P53667 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.06■□□□□ 0.8
LIMK1P53667 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
LIMK1P53667 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LIMK1P53667 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LIMK1P53667 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LIMK1P53667 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
LIMK1P53667 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LIMK1P53667 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LIMK1P53667 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.05■□□□□ 0.8
LIMK1P53667 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LIMK1P53667 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.05■□□□□ 0.8
LIMK1P53667 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
LIMK1P53667 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.05■□□□□ 0.8
LIMK1P53667 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.05■□□□□ 0.8
LIMK1P53667 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LIMK1P53667 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LIMK1P53667 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LIMK1P53667 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LIMK1P53667 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
LIMK1P53667 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
LIMK1P53667 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LIMK1P53667 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LIMK1P53667 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.05■□□□□ 0.8
LIMK1P53667 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
LIMK1P53667 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
LIMK1P53667 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LIMK1P53667 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
LIMK1P53667 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.04■□□□□ 0.8
LIMK1P53667 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LIMK1P53667 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LIMK1P53667 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.04■□□□□ 0.8
LIMK1P53667 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.04■□□□□ 0.8
LIMK1P53667 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.04■□□□□ 0.8
LIMK1P53667 AF186192.3-201ENST00000583427 947 ntBASIC20.04■□□□□ 0.8
LIMK1P53667 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.04■□□□□ 0.8
LIMK1P53667 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LIMK1P53667 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
LIMK1P53667 AC092053.2-201ENST00000640557 1818 ntBASIC20.04■□□□□ 0.8
LIMK1P53667 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LIMK1P53667 AC026310.3-201ENST00000625186 2373 ntBASIC20.03■□□□□ 0.8
LIMK1P53667 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms