Protein–RNA interactions for Protein: P53549

RPT4, 26S proteasome subunit RPT4, yeastyeast

Known RBP Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPT4P53549 COX1Q0045 1605 nt1.91□□□□□ -2.1
RPT4P53549 MNL2YLR057W 2550 nt1.91□□□□□ -2.1
RPT4P53549 YLR149CYLR149C 2193 nt1.91□□□□□ -2.1
RPT4P53549 YGR025WYGR025W 303 nt1.91□□□□□ -2.1
RPT4P53549 NBL1YHR199C-A 222 nt1.91□□□□□ -2.1
RPT4P53549 TOM22YNL131W 459 nt1.91□□□□□ -2.1
RPT4P53549 CDC31YOR257W 486 nt1.91□□□□□ -2.1
RPT4P53549 NUP120YKL057C 3114 nt1.91□□□□□ -2.1
RPT4P53549 DOT6YER088C 2013 nt1.9□□□□□ -2.11
RPT4P53549 CDC24YAL041W 2565 nt1.9□□□□□ -2.11
RPT4P53549 YHR214C-BYHR214C-B 5382 nt1.9□□□□□ -2.11
RPT4P53549 YER121WYER121W 345 nt1.9□□□□□ -2.11
RPT4P53549 RPS18BYML026C 441 nt1.9□□□□□ -2.11
RPT4P53549 snR13snR13 124 nt1.9□□□□□ -2.11
RPT4P53549 EGD1YPL037C 474 nt1.9□□□□□ -2.11
RPT4P53549 YPR146CYPR146C 330 nt1.9□□□□□ -2.11
RPT4P53549 snR41snR41 95 nt1.9□□□□□ -2.11
RPT4P53549 YBR224WYBR224W 516 nt1.9□□□□□ -2.11
RPT4P53549 YSW1YBR148W 1830 nt1.89□□□□□ -2.11
RPT4P53549 BRR2YER172C 6492 nt1.89□□□□□ -2.11
RPT4P53549 YCR087C-AYCR087C-A 462 nt1.89□□□□□ -2.11
RPT4P53549 HUR1YGL168W 333 nt1.89□□□□□ -2.11
RPT4P53549 YHR139C-AYHR139C-A 312 nt1.89□□□□□ -2.11
RPT4P53549 RPH1YER169W 2391 nt1.89□□□□□ -2.11
RPT4P53549 SNF5YBR289W 2718 nt1.88□□□□□ -2.11
RPT4P53549 MGA2YIR033W 3342 nt1.88□□□□□ -2.11
RPT4P53549 RTP1YMR185W 2946 nt1.88□□□□□ -2.11
RPT4P53549 CFT2YLR115W 2580 nt1.88□□□□□ -2.11
RPT4P53549 PEP3YLR148W 2757 nt1.87□□□□□ -2.11
RPT4P53549 SMY1YKL079W 1971 nt1.87□□□□□ -2.11
RPT4P53549 GCN2YDR283C 4980 nt1.87□□□□□ -2.11
RPT4P53549 FCF2YLR051C 654 nt1.87□□□□□ -2.11
RPT4P53549 PGA1YNL158W 597 nt1.87□□□□□ -2.11
RPT4P53549 YBL083CYBL083C 426 nt1.87□□□□□ -2.11
RPT4P53549 snR54snR54 86 nt1.87□□□□□ -2.11
RPT4P53549 CAT8YMR280C 4302 nt1.87□□□□□ -2.11
RPT4P53549 AGC1YPR021C 2709 nt1.87□□□□□ -2.11
RPT4P53549 PLC1YPL268W 2610 nt1.87□□□□□ -2.11
RPT4P53549 SAC3YDR159W 3906 nt1.86□□□□□ -2.11
RPT4P53549 SLM1YIL105C 2061 nt1.86□□□□□ -2.11
RPT4P53549 VPS20YMR077C 666 nt1.86□□□□□ -2.11
RPT4P53549 CYB5YNL111C 363 nt1.86□□□□□ -2.11
RPT4P53549 YBR121C-AYBR121C-A 159 nt1.86□□□□□ -2.11
RPT4P53549 RVS161YCR009C 798 nt1.85□□□□□ -2.11
RPT4P53549 QCR7YDR529C 384 nt1.85□□□□□ -2.11
RPT4P53549 YOR032W-AYOR032W-A 201 nt1.85□□□□□ -2.11
RPT4P53549 YOR146WYOR146W 306 nt1.85□□□□□ -2.11
RPT4P53549 YPR177CYPR177C 372 nt1.85□□□□□ -2.11
RPT4P53549 HCS1YKL017C 2052 nt1.85□□□□□ -2.11
RPT4P53549 CRG1YHR209W 876 nt1.84□□□□□ -2.11
RPT4P53549 YJL007CYJL007C 315 nt1.84□□□□□ -2.11
RPT4P53549 TMA7YLR262C-A 195 nt1.84□□□□□ -2.11
RPT4P53549 CMC2YBL059C-A 330 nt1.84□□□□□ -2.11
RPT4P53549 CDC33YOL139C 642 nt1.84□□□□□ -2.11
RPT4P53549 YBR184WYBR184W 1572 nt1.84□□□□□ -2.12
RPT4P53549 YCR043CYCR043C 384 nt1.83□□□□□ -2.12
RPT4P53549 YCR102W-AYCR102W-A 198 nt1.83□□□□□ -2.12
RPT4P53549 PFD1YJL179W 330 nt1.83□□□□□ -2.12
RPT4P53549 CHS1YNL192W 3396 nt1.83□□□□□ -2.12
RPT4P53549 BTT1YDR252W 450 nt1.82□□□□□ -2.12
RPT4P53549 TMA22YJR014W 597 nt1.82□□□□□ -2.12
RPT4P53549 YLR101CYLR101C 396 nt1.82□□□□□ -2.12
RPT4P53549 YMR153C-AYMR153C-A 336 nt1.82□□□□□ -2.12
RPT4P53549 YPL238CYPL238C 390 nt1.82□□□□□ -2.12
RPT4P53549 LRE1YCL051W 1752 nt1.81□□□□□ -2.12
RPT4P53549 YER006C-AYER006C-A 318 nt1.81□□□□□ -2.12
RPT4P53549 YER135CYER135C 393 nt1.81□□□□□ -2.12
RPT4P53549 BPH1YCR032W 6504 nt1.81□□□□□ -2.12
RPT4P53549 ZRG8YER033C 3231 nt1.81□□□□□ -2.12
RPT4P53549 DAS1YJL149W 1992 nt1.8□□□□□ -2.12
RPT4P53549 URM1YIL008W 300 nt1.8□□□□□ -2.12
RPT4P53549 RPA34YJL148W 702 nt1.8□□□□□ -2.12
RPT4P53549 HUG1YML058W-A 207 nt1.8□□□□□ -2.12
RPT4P53549 TIF11YMR260C 462 nt1.8□□□□□ -2.12
RPT4P53549 YBR032WYBR032W 303 nt1.8□□□□□ -2.12
RPT4P53549 YPL205CYPL205C 345 nt1.8□□□□□ -2.12
RPT4P53549 UBR2YLR024C 5619 nt1.8□□□□□ -2.12
RPT4P53549 MSH6YDR097C 3729 nt1.8□□□□□ -2.12
RPT4P53549 SEF1YBL066C 3447 nt1.79□□□□□ -2.12
RPT4P53549 MYO2YOR326W 4725 nt1.79□□□□□ -2.12
RPT4P53549 DNF3YMR162C 4971 nt1.79□□□□□ -2.12
RPT4P53549 YER023C-AYER023C-A 213 nt1.78□□□□□ -2.12
RPT4P53549 YKL183C-AYKL183C-A 213 nt1.78□□□□□ -2.12
RPT4P53549 YPR099CYPR099C 357 nt1.78□□□□□ -2.12
RPT4P53549 MDM20YOL076W 2391 nt1.78□□□□□ -2.12
RPT4P53549 DFG16YOR030W 1860 nt1.77□□□□□ -2.13
RPT4P53549 RPL42BYHR141C 321 nt1.77□□□□□ -2.13
RPT4P53549 YIL102CYIL102C 306 nt1.77□□□□□ -2.13
RPT4P53549 RPL42AYNL162W 321 nt1.77□□□□□ -2.13
RPT4P53549 YJR039WYJR039W 3366 nt1.76□□□□□ -2.13
RPT4P53549 YDL152WYDL152W 366 nt1.76□□□□□ -2.13
RPT4P53549 STF2YGR008C 255 nt1.76□□□□□ -2.13
RPT4P53549 YJR157WYJR157W 363 nt1.76□□□□□ -2.13
RPT4P53549 NFU1YKL040C 771 nt1.76□□□□□ -2.13
RPT4P53549 CGI121YML036W 546 nt1.76□□□□□ -2.13
RPT4P53549 ZEO1YOL109W 342 nt1.76□□□□□ -2.13
RPT4P53549 LHS1YKL073W 2646 nt1.76□□□□□ -2.13
RPT4P53549 YNL144CYNL144C 2223 nt1.75□□□□□ -2.13
RPT4P53549 HIR3YJR140C 4947 nt1.75□□□□□ -2.13
RPT4P53549 PAN3YKL025C 2040 nt1.75□□□□□ -2.13
Retrieved 100 of 7,029 protein–RNA pairs in 14.5 ms