Protein–RNA interactions for Protein: P48443

RXRG, Retinoic acid receptor RXR-gamma, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRGP48443 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RXRGP48443 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.25■□□□□ 0.83
RXRGP48443 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
RXRGP48443 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.24■□□□□ 0.83
RXRGP48443 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RXRGP48443 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
RXRGP48443 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
RXRGP48443 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RXRGP48443 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
RXRGP48443 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.24■□□□□ 0.83
RXRGP48443 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.24■□□□□ 0.83
RXRGP48443 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.24■□□□□ 0.83
RXRGP48443 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
RXRGP48443 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RXRGP48443 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.24■□□□□ 0.83
RXRGP48443 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RXRGP48443 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.24■□□□□ 0.83
RXRGP48443 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RXRGP48443 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RXRGP48443 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.24■□□□□ 0.83
RXRGP48443 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.24■□□□□ 0.83
RXRGP48443 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.24■□□□□ 0.83
RXRGP48443 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.24■□□□□ 0.83
RXRGP48443 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RXRGP48443 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RXRGP48443 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
RXRGP48443 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RXRGP48443 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
RXRGP48443 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RXRGP48443 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
RXRGP48443 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RXRGP48443 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.23■□□□□ 0.83
RXRGP48443 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RXRGP48443 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RXRGP48443 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
RXRGP48443 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RXRGP48443 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
RXRGP48443 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.23■□□□□ 0.83
RXRGP48443 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RXRGP48443 RPPH1-201ENST00000516869 333 ntBASIC20.23■□□□□ 0.83
RXRGP48443 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.23■□□□□ 0.83
RXRGP48443 RN7SL471P-201ENST00000580476 299 ntBASIC20.23■□□□□ 0.83
RXRGP48443 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RXRGP48443 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.23■□□□□ 0.83
RXRGP48443 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.23■□□□□ 0.83
RXRGP48443 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RXRGP48443 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
RXRGP48443 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
RXRGP48443 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
RXRGP48443 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.22■□□□□ 0.83
RXRGP48443 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RXRGP48443 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
RXRGP48443 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.22■□□□□ 0.83
RXRGP48443 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.22■□□□□ 0.83
RXRGP48443 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RXRGP48443 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RXRGP48443 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RXRGP48443 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
RXRGP48443 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RXRGP48443 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RXRGP48443 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.22■□□□□ 0.83
RXRGP48443 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.22■□□□□ 0.83
RXRGP48443 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.22■□□□□ 0.83
RXRGP48443 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.22■□□□□ 0.83
RXRGP48443 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.22■□□□□ 0.83
RXRGP48443 AC105020.6-201ENST00000621523 1217 ntBASIC20.22■□□□□ 0.83
RXRGP48443 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RXRGP48443 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
RXRGP48443 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RXRGP48443 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RXRGP48443 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RXRGP48443 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RXRGP48443 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.22■□□□□ 0.83
RXRGP48443 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
RXRGP48443 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RXRGP48443 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RXRGP48443 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
RXRGP48443 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.21■□□□□ 0.83
RXRGP48443 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RXRGP48443 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.21■□□□□ 0.83
RXRGP48443 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
RXRGP48443 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RXRGP48443 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RXRGP48443 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.21■□□□□ 0.83
RXRGP48443 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.21■□□□□ 0.83
RXRGP48443 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.21■□□□□ 0.83
RXRGP48443 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
RXRGP48443 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RXRGP48443 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.21■□□□□ 0.83
RXRGP48443 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.21■□□□□ 0.83
RXRGP48443 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
RXRGP48443 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RXRGP48443 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RXRGP48443 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RXRGP48443 AC116050.2-201ENST00000612102 1779 ntBASIC20.21■□□□□ 0.83
RXRGP48443 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RXRGP48443 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.2■□□□□ 0.82
RXRGP48443 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.2■□□□□ 0.82
RXRGP48443 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
RXRGP48443 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms