Protein–RNA interactions for Protein: P40505

SDS3, Transcriptional regulatory protein SDS3, yeastyeast

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SDS3P40505 YLR053CYLR053C 327 nt2.76□□□□□ -1.97
SDS3P40505 YMR172C-AYMR172C-A 384 nt2.76□□□□□ -1.97
SDS3P40505 SAR1YPL218W 573 nt2.76□□□□□ -1.97
SDS3P40505 TRM7YBR061C 933 nt2.76□□□□□ -1.97
SDS3P40505 YBR121C-AYBR121C-A 159 nt2.76□□□□□ -1.97
SDS3P40505 BFA1YJR053W 1725 nt2.76□□□□□ -1.97
SDS3P40505 VIK1YPL253C 1944 nt2.76□□□□□ -1.97
SDS3P40505 SMY2YBR172C 2223 nt2.75□□□□□ -1.97
SDS3P40505 YER121WYER121W 345 nt2.75□□□□□ -1.97
SDS3P40505 YMR194C-AYMR194C-A 225 nt2.75□□□□□ -1.97
SDS3P40505 RPL36AYMR194W 303 nt2.75□□□□□ -1.97
SDS3P40505 CYB5YNL111C 363 nt2.75□□□□□ -1.97
SDS3P40505 snR60snR60 104 nt2.74□□□□□ -1.97
SDS3P40505 YHL041WYHL041W 450 nt2.74□□□□□ -1.97
SDS3P40505 AYR1YIL124W 894 nt2.74□□□□□ -1.97
SDS3P40505 ECM25YJL201W 1800 nt2.74□□□□□ -1.97
SDS3P40505 YKU70YMR284W 1809 nt2.74□□□□□ -1.97
SDS3P40505 SMC6YLR383W 3345 nt2.74□□□□□ -1.97
SDS3P40505 RGR1YLR071C 3249 nt2.74□□□□□ -1.97
SDS3P40505 COG3YER157W 2406 nt2.73□□□□□ -1.97
SDS3P40505 YKU80YMR106C 1890 nt2.73□□□□□ -1.97
SDS3P40505 SAK1YER129W 3429 nt2.73□□□□□ -1.97
SDS3P40505 YEL014CYEL014C 306 nt2.73□□□□□ -1.97
SDS3P40505 YHR032W-AYHR032W-A 180 nt2.73□□□□□ -1.97
SDS3P40505 tW(CCA)G1tW(CCA)G1 72 nt2.73□□□□□ -1.97
SDS3P40505 tW(CCA)G2tW(CCA)G2 72 nt2.73□□□□□ -1.97
SDS3P40505 tW(CCA)JtW(CCA)J 72 nt2.73□□□□□ -1.97
SDS3P40505 tW(CCA)KtW(CCA)K 72 nt2.73□□□□□ -1.97
SDS3P40505 tW(CCA)MtW(CCA)M 72 nt2.73□□□□□ -1.97
SDS3P40505 tW(CCA)PtW(CCA)P 72 nt2.73□□□□□ -1.97
SDS3P40505 YMR324CYMR324C 243 nt2.73□□□□□ -1.97
SDS3P40505 SSE1YPL106C 2082 nt2.73□□□□□ -1.97
SDS3P40505 snR43snR43 209 nt2.72□□□□□ -1.97
SDS3P40505 YDR034C-DYDR034C-D 5313 nt2.72□□□□□ -1.97
SDS3P40505 MOT1YPL082C 5604 nt2.72□□□□□ -1.97
SDS3P40505 tF(GAA)QtF(GAA)Q 75 nt2.71□□□□□ -1.98
SDS3P40505 YNL010WYNL010W 726 nt2.71□□□□□ -1.98
SDS3P40505 VPS13YLL040C 9435 nt2.71□□□□□ -1.98
SDS3P40505 ORC2YBR060C 1863 nt2.71□□□□□ -1.98
SDS3P40505 ARP8YOR141C 2646 nt2.71□□□□□ -1.98
SDS3P40505 SGS1YMR190C 4344 nt2.7□□□□□ -1.98
SDS3P40505 NUM1YDR150W 8247 nt2.7□□□□□ -1.98
SDS3P40505 HHT1YBR010W 411 nt2.7□□□□□ -1.98
SDS3P40505 YPR063CYPR063C 423 nt2.7□□□□□ -1.98
SDS3P40505 snR48snR48 113 nt2.7□□□□□ -1.98
SDS3P40505 SSN2YDR443C 4263 nt2.7□□□□□ -1.98
SDS3P40505 PDR3YBL005W 2931 nt2.7□□□□□ -1.98
SDS3P40505 STE11YLR362W 2154 nt2.7□□□□□ -1.98
SDS3P40505 RBK1YCR036W 1002 nt2.69□□□□□ -1.98
SDS3P40505 YLR140WYLR140W 327 nt2.69□□□□□ -1.98
SDS3P40505 PHO2YDL106C 1680 nt2.69□□□□□ -1.98
SDS3P40505 UBP1YDL122W 2430 nt2.69□□□□□ -1.98
SDS3P40505 SEC7YDR170C 6030 nt2.69□□□□□ -1.98
SDS3P40505 INO80YGL150C 4470 nt2.68□□□□□ -1.98
SDS3P40505 YGR250CYGR250C 2346 nt2.68□□□□□ -1.98
SDS3P40505 NPC2YDL046W 522 nt2.68□□□□□ -1.98
SDS3P40505 QCR7YDR529C 384 nt2.68□□□□□ -1.98
SDS3P40505 VPS55YJR044C 423 nt2.68□□□□□ -1.98
SDS3P40505 YOR055WYOR055W 435 nt2.68□□□□□ -1.98
SDS3P40505 MRD1YPR112C 2664 nt2.68□□□□□ -1.98
SDS3P40505 YDR186CYDR186C 2634 nt2.68□□□□□ -1.98
SDS3P40505 YDR098C-BYDR098C-B 5268 nt2.67□□□□□ -1.98
SDS3P40505 YDR210C-DYDR210C-D 5268 nt2.67□□□□□ -1.98
SDS3P40505 YDR316W-BYDR316W-B 5268 nt2.67□□□□□ -1.98
SDS3P40505 YDR365W-BYDR365W-B 5268 nt2.67□□□□□ -1.98
SDS3P40505 YER138CYER138C 5268 nt2.67□□□□□ -1.98
SDS3P40505 YER160CYER160C 5268 nt2.67□□□□□ -1.98
SDS3P40505 YGR038C-BYGR038C-B 5268 nt2.67□□□□□ -1.98
SDS3P40505 YGR161C-DYGR161C-D 5268 nt2.67□□□□□ -1.98
SDS3P40505 YJR027WYJR027W 5268 nt2.67□□□□□ -1.98
SDS3P40505 YLR157C-BYLR157C-B 5268 nt2.67□□□□□ -1.98
SDS3P40505 YML039WYML039W 5268 nt2.67□□□□□ -1.98
SDS3P40505 YML045WYML045W 5268 nt2.67□□□□□ -1.98
SDS3P40505 YMR050CYMR050C 5268 nt2.67□□□□□ -1.98
SDS3P40505 YOL103W-BYOL103W-B 5268 nt2.67□□□□□ -1.98
SDS3P40505 YBR012W-BYBR012W-B 5271 nt2.67□□□□□ -1.98
SDS3P40505 YOR142W-BYOR142W-B 5268 nt2.67□□□□□ -1.98
SDS3P40505 YPL257W-BYPL257W-B 5268 nt2.67□□□□□ -1.98
SDS3P40505 YPR158W-BYPR158W-B 5271 nt2.67□□□□□ -1.98
SDS3P40505 OLI1Q0130 231 nt2.67□□□□□ -1.98
SDS3P40505 LSO2YGR169C-A 279 nt2.67□□□□□ -1.98
SDS3P40505 RPS27AYKL156W 249 nt2.67□□□□□ -1.98
SDS3P40505 RPL25YOL127W 429 nt2.67□□□□□ -1.98
SDS3P40505 APC2YLR127C 2562 nt2.67□□□□□ -1.98
SDS3P40505 KAR3YPR141C 2190 nt2.66□□□□□ -1.98
SDS3P40505 YMR31YFR049W 372 nt2.66□□□□□ -1.98
SDS3P40505 EMC6YLL014W 327 nt2.66□□□□□ -1.98
SDS3P40505 DIS3YOL021C 3006 nt2.66□□□□□ -1.98
SDS3P40505 KRE33YNL132W 3171 nt2.65□□□□□ -1.98
SDS3P40505 FKS3YMR306W 5358 nt2.65□□□□□ -1.98
SDS3P40505 HDA3YPR179C 1968 nt2.65□□□□□ -1.98
SDS3P40505 PHO91YNR013C 2685 nt2.65□□□□□ -1.99
SDS3P40505 YIL156W-BYIL156W-B 222 nt2.65□□□□□ -1.99
SDS3P40505 YMR321CYMR321C 318 nt2.65□□□□□ -1.99
SDS3P40505 YNL028WYNL028W 318 nt2.65□□□□□ -1.99
SDS3P40505 YDR210W-BYDR210W-B 5313 nt2.64□□□□□ -1.99
SDS3P40505 YDR261W-BYDR261W-B 5313 nt2.64□□□□□ -1.99
SDS3P40505 YFL002W-AYFL002W-A 5313 nt2.64□□□□□ -1.99
SDS3P40505 YGR161W-BYGR161W-B 5313 nt2.64□□□□□ -1.99
SDS3P40505 YLR410W-BYLR410W-B 5313 nt2.64□□□□□ -1.99
Retrieved 100 of 7,029 protein–RNA pairs in 51.9 ms