Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CEACAM3P40198 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CEACAM3P40198 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CEACAM3P40198 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC16.51■□□□□ 0.23
CEACAM3P40198 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CEACAM3P40198 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
CEACAM3P40198 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CEACAM3P40198 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CEACAM3P40198 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC16.51■□□□□ 0.23
CEACAM3P40198 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC16.51■□□□□ 0.23
CEACAM3P40198 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC16.51■□□□□ 0.23
CEACAM3P40198 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC16.51■□□□□ 0.23
CEACAM3P40198 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CEACAM3P40198 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CEACAM3P40198 SERPINH1P1-201ENST00000419794 1249 ntBASIC16.51■□□□□ 0.23
CEACAM3P40198 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
CEACAM3P40198 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CEACAM3P40198 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC16.51■□□□□ 0.23
CEACAM3P40198 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC16.51■□□□□ 0.23
CEACAM3P40198 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC16.51■□□□□ 0.23
CEACAM3P40198 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC16.51■□□□□ 0.23
CEACAM3P40198 WT1-AS_3.1-201ENST00000613262 234 ntBASIC16.51■□□□□ 0.23
CEACAM3P40198 AL109923.1-201ENST00000618799 583 ntBASIC16.51■□□□□ 0.23
CEACAM3P40198 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
CEACAM3P40198 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
CEACAM3P40198 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC16.51■□□□□ 0.23
CEACAM3P40198 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CEACAM3P40198 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CEACAM3P40198 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC16.51■□□□□ 0.23
CEACAM3P40198 GCK-205ENST00000437084 1385 ntTSL 5 BASIC16.51■□□□□ 0.23
CEACAM3P40198 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CEACAM3P40198 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC16.5■□□□□ 0.23
CEACAM3P40198 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC16.5■□□□□ 0.23
CEACAM3P40198 BX276092.2-201ENST00000417668 665 ntBASIC16.5■□□□□ 0.23
CEACAM3P40198 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC16.5■□□□□ 0.23
CEACAM3P40198 TSPY6P-201ENST00000448518 926 ntBASIC16.5■□□□□ 0.23
CEACAM3P40198 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CEACAM3P40198 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC16.5■□□□□ 0.23
CEACAM3P40198 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CEACAM3P40198 MIR4758-201ENST00000577688 71 ntBASIC16.5■□□□□ 0.23
CEACAM3P40198 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC16.5■□□□□ 0.23
CEACAM3P40198 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC16.5■□□□□ 0.23
CEACAM3P40198 AC105020.6-201ENST00000621523 1217 ntBASIC16.5■□□□□ 0.23
CEACAM3P40198 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC16.5■□□□□ 0.23
CEACAM3P40198 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC16.5■□□□□ 0.23
CEACAM3P40198 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CEACAM3P40198 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CEACAM3P40198 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CEACAM3P40198 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CEACAM3P40198 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CEACAM3P40198 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC16.5■□□□□ 0.23
CEACAM3P40198 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC16.49■□□□□ 0.23
CEACAM3P40198 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
CEACAM3P40198 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CEACAM3P40198 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CEACAM3P40198 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
CEACAM3P40198 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CEACAM3P40198 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CEACAM3P40198 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CEACAM3P40198 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC16.49■□□□□ 0.23
CEACAM3P40198 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC16.49■□□□□ 0.23
CEACAM3P40198 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CEACAM3P40198 KRT8P36-201ENST00000489121 1440 ntBASIC16.49■□□□□ 0.23
CEACAM3P40198 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC16.49■□□□□ 0.23
CEACAM3P40198 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CEACAM3P40198 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC16.49■□□□□ 0.23
CEACAM3P40198 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CEACAM3P40198 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC16.49■□□□□ 0.23
CEACAM3P40198 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC16.49■□□□□ 0.23
CEACAM3P40198 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CEACAM3P40198 AC138932.1-201ENST00000534164 6830 ntBASIC16.49■□□□□ 0.23
CEACAM3P40198 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CEACAM3P40198 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CEACAM3P40198 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CEACAM3P40198 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CEACAM3P40198 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC16.48■□□□□ 0.23
CEACAM3P40198 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CEACAM3P40198 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CEACAM3P40198 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CEACAM3P40198 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC16.48■□□□□ 0.23
CEACAM3P40198 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CEACAM3P40198 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CEACAM3P40198 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CEACAM3P40198 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC16.48■□□□□ 0.23
CEACAM3P40198 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CEACAM3P40198 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CEACAM3P40198 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CEACAM3P40198 MAP2K4P1-201ENST00000438453 1195 ntBASIC16.48■□□□□ 0.23
CEACAM3P40198 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC16.48■□□□□ 0.23
CEACAM3P40198 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CEACAM3P40198 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC16.48■□□□□ 0.23
CEACAM3P40198 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CEACAM3P40198 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CEACAM3P40198 ME2-216ENST00000639850 2331 ntTSL 5 BASIC16.47■□□□□ 0.23
CEACAM3P40198 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CEACAM3P40198 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CEACAM3P40198 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CEACAM3P40198 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CEACAM3P40198 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CEACAM3P40198 MIPEPP3-201ENST00000412105 444 ntBASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms