Protein–RNA interactions for Protein: P39962

YCK3, Casein kinase I homolog 3, yeastyeast

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YCK3P39962 SFB2YNL049C 2631 nt4.89□□□□□ -1.63
YCK3P39962 GLC3YEL011W 2115 nt4.89□□□□□ -1.63
YCK3P39962 YER187WYER187W 426 nt4.88□□□□□ -1.63
YCK3P39962 VTH1YIL173W 4650 nt4.88□□□□□ -1.63
YCK3P39962 VTH2YJL222W 4650 nt4.88□□□□□ -1.63
YCK3P39962 MNR2YKL064W 2910 nt4.88□□□□□ -1.63
YCK3P39962 RNR3YIL066C 2610 nt4.88□□□□□ -1.63
YCK3P39962 YOL131WYOL131W 327 nt4.87□□□□□ -1.63
YCK3P39962 NUP116YMR047C 3342 nt4.87□□□□□ -1.63
YCK3P39962 MLH1YMR167W 2310 nt4.86□□□□□ -1.63
YCK3P39962 CHS2YBR038W 2892 nt4.86□□□□□ -1.63
YCK3P39962 YRF1-4YLR466W 4149 nt4.85□□□□□ -1.63
YCK3P39962 AI1Q0050 2505 nt4.85□□□□□ -1.63
YCK3P39962 ZDS2YML109W 2829 nt4.85□□□□□ -1.63
YCK3P39962 SPT16YGL207W 3108 nt4.85□□□□□ -1.63
YCK3P39962 PHO81YGR233C 3537 nt4.84□□□□□ -1.63
YCK3P39962 PWP2YCR057C 2772 nt4.84□□□□□ -1.63
YCK3P39962 YDR209CYDR209C 414 nt4.84□□□□□ -1.63
YCK3P39962 COA6YMR244C-A 315 nt4.84□□□□□ -1.63
YCK3P39962 URB2YJR041C 3525 nt4.84□□□□□ -1.63
YCK3P39962 SEF1YBL066C 3447 nt4.84□□□□□ -1.63
YCK3P39962 FRK1YPL141C 2598 nt4.84□□□□□ -1.64
YCK3P39962 SIZ1YDR409W 2715 nt4.83□□□□□ -1.64
YCK3P39962 YBR296C-AYBR296C-A 120 nt4.83□□□□□ -1.64
YCK3P39962 YIL080WYIL080W 4722 nt4.82□□□□□ -1.64
YCK3P39962 YKU80YMR106C 1890 nt4.82□□□□□ -1.64
YCK3P39962 YCR047W-AYCR047W-A 207 nt4.82□□□□□ -1.64
YCK3P39962 YHR073W-AYHR073W-A 177 nt4.82□□□□□ -1.64
YCK3P39962 SLN1YIL147C 3663 nt4.82□□□□□ -1.64
YCK3P39962 BEM3YPL115C 3387 nt4.82□□□□□ -1.64
YCK3P39962 YIR007WYIR007W 2295 nt4.81□□□□□ -1.64
YCK3P39962 GDH2YDL215C 3279 nt4.81□□□□□ -1.64
YCK3P39962 EMC1YCL045C 2283 nt4.81□□□□□ -1.64
YCK3P39962 PKC1YBL105C 3456 nt4.81□□□□□ -1.64
YCK3P39962 RRP6YOR001W 2202 nt4.8□□□□□ -1.64
YCK3P39962 MAK21YDR060W 3078 nt4.8□□□□□ -1.64
YCK3P39962 YJL026C-AYJL026C-A 222 nt4.8□□□□□ -1.64
YCK3P39962 RET1YOR207C 3450 nt4.8□□□□□ -1.64
YCK3P39962 EIS1YMR031C 2532 nt4.8□□□□□ -1.64
YCK3P39962 MCM6YGL201C 3054 nt4.79□□□□□ -1.64
YCK3P39962 VHC1YBR235W 3363 nt4.79□□□□□ -1.64
YCK3P39962 RPS29AYLR388W 171 nt4.79□□□□□ -1.64
YCK3P39962 CRS5YOR031W 210 nt4.79□□□□□ -1.64
YCK3P39962 DUR1,2YBR208C 5508 nt4.78□□□□□ -1.64
YCK3P39962 TRL1YJL087C 2484 nt4.78□□□□□ -1.64
YCK3P39962 MGA2YIR033W 3342 nt4.77□□□□□ -1.65
YCK3P39962 ACC1YNR016C 6702 nt4.77□□□□□ -1.65
YCK3P39962 ERG7YHR072W 2196 nt4.77□□□□□ -1.65
YCK3P39962 SNT1YCR033W 3681 nt4.77□□□□□ -1.65
YCK3P39962 YGR022CYGR022C 330 nt4.77□□□□□ -1.65
YCK3P39962 SNC1YAL030W 354 nt4.77□□□□□ -1.65
YCK3P39962 snR38snR38 95 nt4.77□□□□□ -1.65
YCK3P39962 NAM2YLR382C 2685 nt4.76□□□□□ -1.65
YCK3P39962 ANB1YJR047C 474 nt4.76□□□□□ -1.65
YCK3P39962 RPS12YOR369C 432 nt4.76□□□□□ -1.65
YCK3P39962 ISM1YPL040C 3009 nt4.76□□□□□ -1.65
YCK3P39962 BRE4YDL231C 3378 nt4.76□□□□□ -1.65
YCK3P39962 SEC10YLR166C 2616 nt4.76□□□□□ -1.65
YCK3P39962 FOL1YNL256W 2475 nt4.75□□□□□ -1.65
YCK3P39962 RPL23BYER117W 414 nt4.75□□□□□ -1.65
YCK3P39962 YDR089WYDR089W 2610 nt4.75□□□□□ -1.65
YCK3P39962 SNF3YDL194W 2655 nt4.74□□□□□ -1.65
YCK3P39962 VID30YGL227W 2877 nt4.74□□□□□ -1.65
YCK3P39962 SSK22YCR073C 3996 nt4.74□□□□□ -1.65
YCK3P39962 HOT1YMR172W 2160 nt4.74□□□□□ -1.65
YCK3P39962 FAP1YNL023C 2898 nt4.74□□□□□ -1.65
YCK3P39962 BUL1YMR275C 2931 nt4.73□□□□□ -1.65
YCK3P39962 AFI1YOR129C 2682 nt4.73□□□□□ -1.65
YCK3P39962 YHR180C-BYHR180C-B 105 nt4.73□□□□□ -1.65
YCK3P39962 YKL156C-AYKL156C-A 117 nt4.73□□□□□ -1.65
YCK3P39962 YNR075C-AYNR075C-A 93 nt4.73□□□□□ -1.65
YCK3P39962 SSB1YDL229W 1842 nt4.72□□□□□ -1.65
YCK3P39962 SPT4YGR063C 309 nt4.72□□□□□ -1.65
YCK3P39962 YGR176WYGR176W 348 nt4.72□□□□□ -1.65
YCK3P39962 POL3YDL102W 3294 nt4.72□□□□□ -1.65
YCK3P39962 21S_rRNA21S_rRNA 3296 nt4.71□□□□□ -1.66
YCK3P39962 YGL014C-AYGL014C-A 162 nt4.71□□□□□ -1.66
YCK3P39962 PFK1YGR240C 2964 nt4.71□□□□□ -1.66
YCK3P39962 KAP95YLR347C 2586 nt4.71□□□□□ -1.66
YCK3P39962 SAS3YBL052C 2496 nt4.71□□□□□ -1.66
YCK3P39962 PSK2YOL045W 3306 nt4.71□□□□□ -1.66
YCK3P39962 RSC3YDR303C 2658 nt4.7□□□□□ -1.66
YCK3P39962 SAP4YGL229C 2457 nt4.7□□□□□ -1.66
YCK3P39962 YLR035C-AYLR035C-A 3468 nt4.7□□□□□ -1.66
YCK3P39962 RPL37BYDR500C 267 nt4.7□□□□□ -1.66
YCK3P39962 FUN30YAL019W 3396 nt4.69□□□□□ -1.66
YCK3P39962 RAT1YOR048C 3021 nt4.69□□□□□ -1.66
YCK3P39962 YJR112W-AYJR112W-A 330 nt4.69□□□□□ -1.66
YCK3P39962 YLR299C-AYLR299C-A 93 nt4.69□□□□□ -1.66
YCK3P39962 BBC1YJL020C 3474 nt4.69□□□□□ -1.66
YCK3P39962 COG4YPR105C 2586 nt4.69□□□□□ -1.66
YCK3P39962 RPM2YML091C 3609 nt4.69□□□□□ -1.66
YCK3P39962 NAT1YDL040C 2565 nt4.68□□□□□ -1.66
YCK3P39962 tN(GUU)CtN(GUU)C 74 nt4.68□□□□□ -1.66
YCK3P39962 tN(GUU)FtN(GUU)F 74 nt4.68□□□□□ -1.66
YCK3P39962 tN(GUU)GtN(GUU)G 74 nt4.68□□□□□ -1.66
YCK3P39962 tN(GUU)KtN(GUU)K 74 nt4.68□□□□□ -1.66
YCK3P39962 tN(GUU)LtN(GUU)L 74 nt4.68□□□□□ -1.66
YCK3P39962 tN(GUU)N1tN(GUU)N1 74 nt4.68□□□□□ -1.66
YCK3P39962 tN(GUU)N2tN(GUU)N2 74 nt4.68□□□□□ -1.66
Retrieved 100 of 7,029 protein–RNA pairs in 18.4 ms