Protein–RNA interactions for Protein: P33527

ABCC1, Multidrug resistance-associated protein 1, humanhuman

Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC1P33527 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
ABCC1P33527 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC30.67■■■□□ 2.5
ABCC1P33527 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC30.67■■■□□ 2.5
ABCC1P33527 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC30.67■■■□□ 2.5
ABCC1P33527 KRT8P36-201ENST00000489121 1440 ntBASIC30.67■■■□□ 2.5
ABCC1P33527 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
ABCC1P33527 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC30.67■■■□□ 2.5
ABCC1P33527 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC30.67■■■□□ 2.5
ABCC1P33527 AL049597.2-201ENST00000565575 961 ntBASIC30.67■■■□□ 2.5
ABCC1P33527 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC30.67■■■□□ 2.5
ABCC1P33527 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC30.67■■■□□ 2.5
ABCC1P33527 MIR2861-201ENST00000636310 90 ntBASIC30.67■■■□□ 2.5
ABCC1P33527 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
ABCC1P33527 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC30.66■■■□□ 2.5
ABCC1P33527 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC30.66■■■□□ 2.5
ABCC1P33527 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
ABCC1P33527 RNF146-204ENST00000476956 884 ntTSL 2 BASIC30.66■■■□□ 2.5
ABCC1P33527 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC30.66■■■□□ 2.5
ABCC1P33527 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
ABCC1P33527 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
ABCC1P33527 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
ABCC1P33527 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
ABCC1P33527 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC30.65■■■□□ 2.5
ABCC1P33527 PTBP1P-201ENST00000554374 1601 ntBASIC30.65■■■□□ 2.5
ABCC1P33527 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC30.65■■■□□ 2.5
ABCC1P33527 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
ABCC1P33527 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
ABCC1P33527 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC30.65■■■□□ 2.5
ABCC1P33527 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
ABCC1P33527 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC30.65■■■□□ 2.5
ABCC1P33527 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC30.65■■■□□ 2.5
ABCC1P33527 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC30.65■■■□□ 2.5
ABCC1P33527 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
ABCC1P33527 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
ABCC1P33527 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
ABCC1P33527 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC30.64■■■□□ 2.5
ABCC1P33527 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
ABCC1P33527 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
ABCC1P33527 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
ABCC1P33527 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC30.64■■■□□ 2.49
ABCC1P33527 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC30.64■■■□□ 2.49
ABCC1P33527 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
ABCC1P33527 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
ABCC1P33527 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
ABCC1P33527 AC073508.3-201ENST00000619697 1419 ntBASIC30.63■■■□□ 2.49
ABCC1P33527 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
ABCC1P33527 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC30.63■■■□□ 2.49
ABCC1P33527 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC30.63■■■□□ 2.49
ABCC1P33527 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC30.63■■■□□ 2.49
ABCC1P33527 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC30.63■■■□□ 2.49
ABCC1P33527 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC30.63■■■□□ 2.49
ABCC1P33527 AC116562.2-201ENST00000507042 360 ntBASIC30.63■■■□□ 2.49
ABCC1P33527 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC30.63■■■□□ 2.49
ABCC1P33527 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC30.63■■■□□ 2.49
ABCC1P33527 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC30.63■■■□□ 2.49
ABCC1P33527 NME3-204ENST00000563498 920 ntTSL 2 BASIC30.63■■■□□ 2.49
ABCC1P33527 NT5C-211ENST00000582170 653 ntTSL 3 BASIC30.63■■■□□ 2.49
ABCC1P33527 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
ABCC1P33527 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC30.62■■■□□ 2.49
ABCC1P33527 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC30.62■■■□□ 2.49
ABCC1P33527 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC30.62■■■□□ 2.49
ABCC1P33527 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
ABCC1P33527 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
ABCC1P33527 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
ABCC1P33527 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
ABCC1P33527 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC30.62■■■□□ 2.49
ABCC1P33527 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC30.62■■■□□ 2.49
ABCC1P33527 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
ABCC1P33527 PNN-205ENST00000556530 601 ntTSL 2 BASIC30.62■■■□□ 2.49
ABCC1P33527 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC30.62■■■□□ 2.49
ABCC1P33527 AC010947.1-201ENST00000623454 693 ntBASIC30.62■■■□□ 2.49
ABCC1P33527 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC30.62■■■□□ 2.49
ABCC1P33527 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
ABCC1P33527 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
ABCC1P33527 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
ABCC1P33527 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
ABCC1P33527 AC011484.1-201ENST00000377652 1995 ntBASIC30.61■■■□□ 2.49
ABCC1P33527 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
ABCC1P33527 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC30.61■■■□□ 2.49
ABCC1P33527 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC30.61■■■□□ 2.49
ABCC1P33527 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
ABCC1P33527 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC30.61■■■□□ 2.49
ABCC1P33527 MIR1238-201ENST00000408483 83 ntBASIC30.61■■■□□ 2.49
ABCC1P33527 SLC25A3P1-201ENST00000443844 931 ntBASIC30.61■■■□□ 2.49
ABCC1P33527 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC30.61■■■□□ 2.49
ABCC1P33527 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
ABCC1P33527 CYP2D8P-201ENST00000433633 1490 ntBASIC30.61■■■□□ 2.49
ABCC1P33527 PALM-207ENST00000590161 2137 ntTSL 4 BASIC30.61■■■□□ 2.49
ABCC1P33527 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC30.6■■■□□ 2.49
ABCC1P33527 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
ABCC1P33527 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
ABCC1P33527 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC30.6■■■□□ 2.49
ABCC1P33527 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC30.6■■■□□ 2.49
ABCC1P33527 AC005363.2-201ENST00000618631 242 ntBASIC30.6■■■□□ 2.49
ABCC1P33527 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC30.6■■■□□ 2.49
ABCC1P33527 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC30.6■■■□□ 2.49
ABCC1P33527 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC30.6■■■□□ 2.49
ABCC1P33527 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
ABCC1P33527 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC30.59■■■□□ 2.49
ABCC1P33527 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC30.59■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms