Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.7■□□□□ 0.74
EPHA3P29320 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.7■□□□□ 0.74
EPHA3P29320 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
EPHA3P29320 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.7■□□□□ 0.74
EPHA3P29320 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
EPHA3P29320 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
EPHA3P29320 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EPHA3P29320 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
EPHA3P29320 AC018445.3-201ENST00000624177 1945 ntBASIC19.7■□□□□ 0.74
EPHA3P29320 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EPHA3P29320 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
EPHA3P29320 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
EPHA3P29320 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
EPHA3P29320 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
EPHA3P29320 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
EPHA3P29320 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.69■□□□□ 0.74
EPHA3P29320 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
EPHA3P29320 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
EPHA3P29320 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.69■□□□□ 0.74
EPHA3P29320 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.69■□□□□ 0.74
EPHA3P29320 AC079140.4-201ENST00000507448 529 ntBASIC19.69■□□□□ 0.74
EPHA3P29320 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
EPHA3P29320 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.69■□□□□ 0.74
EPHA3P29320 AL355001.2-201ENST00000620617 1191 ntBASIC19.69■□□□□ 0.74
EPHA3P29320 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
EPHA3P29320 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
EPHA3P29320 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
EPHA3P29320 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.69■□□□□ 0.74
EPHA3P29320 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.68■□□□□ 0.74
EPHA3P29320 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
EPHA3P29320 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.68■□□□□ 0.74
EPHA3P29320 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
EPHA3P29320 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
EPHA3P29320 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EPHA3P29320 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EPHA3P29320 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EPHA3P29320 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EPHA3P29320 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.68■□□□□ 0.74
EPHA3P29320 AC091305.1-201ENST00000479476 895 ntBASIC19.68■□□□□ 0.74
EPHA3P29320 AC138907.5-202ENST00000569484 235 ntBASIC19.68■□□□□ 0.74
EPHA3P29320 AC131212.1-201ENST00000613771 668 ntBASIC19.68■□□□□ 0.74
EPHA3P29320 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.68■□□□□ 0.74
EPHA3P29320 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.68■□□□□ 0.74
EPHA3P29320 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EPHA3P29320 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EPHA3P29320 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EPHA3P29320 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
EPHA3P29320 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
EPHA3P29320 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
EPHA3P29320 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
EPHA3P29320 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
EPHA3P29320 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
EPHA3P29320 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.67■□□□□ 0.74
EPHA3P29320 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
EPHA3P29320 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
EPHA3P29320 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
EPHA3P29320 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.67■□□□□ 0.74
EPHA3P29320 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.67■□□□□ 0.74
EPHA3P29320 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
EPHA3P29320 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.67■□□□□ 0.74
EPHA3P29320 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.67■□□□□ 0.74
EPHA3P29320 AL354811.1-201ENST00000610286 706 ntBASIC19.67■□□□□ 0.74
EPHA3P29320 AL691432.2-201ENST00000607222 2038 ntBASIC19.67■□□□□ 0.74
EPHA3P29320 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.67■□□□□ 0.74
EPHA3P29320 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
EPHA3P29320 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.67■□□□□ 0.74
EPHA3P29320 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
EPHA3P29320 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
EPHA3P29320 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
EPHA3P29320 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
EPHA3P29320 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
EPHA3P29320 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
EPHA3P29320 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.66■□□□□ 0.74
EPHA3P29320 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
EPHA3P29320 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
EPHA3P29320 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
EPHA3P29320 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
EPHA3P29320 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.66■□□□□ 0.74
EPHA3P29320 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
EPHA3P29320 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
EPHA3P29320 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.66■□□□□ 0.74
EPHA3P29320 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
EPHA3P29320 AL136967.2-201ENST00000623968 743 ntBASIC19.66■□□□□ 0.74
EPHA3P29320 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.66■□□□□ 0.74
EPHA3P29320 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
EPHA3P29320 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.66■□□□□ 0.74
EPHA3P29320 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
EPHA3P29320 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
EPHA3P29320 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EPHA3P29320 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
EPHA3P29320 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.65■□□□□ 0.74
EPHA3P29320 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
EPHA3P29320 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
EPHA3P29320 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.65■□□□□ 0.74
EPHA3P29320 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.65■□□□□ 0.74
EPHA3P29320 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.65■□□□□ 0.74
EPHA3P29320 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.65■□□□□ 0.74
EPHA3P29320 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EPHA3P29320 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EPHA3P29320 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms