Protein–RNA interactions for Protein: P25336

MSH3, DNA mismatch repair protein MSH3, yeastyeast

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH3P25336 PAN3YKL025C 2040 nt3.17□□□□□ -1.9
MSH3P25336 ALK2YBL009W 2031 nt3.17□□□□□ -1.9
MSH3P25336 YIL082W-AYIL082W-A 4497 nt3.16□□□□□ -1.9
MSH3P25336 YNL028WYNL028W 318 nt3.16□□□□□ -1.9
MSH3P25336 KEL2YGR238C 2649 nt3.16□□□□□ -1.9
MSH3P25336 PSK1YAL017W 4071 nt3.16□□□□□ -1.9
MSH3P25336 BPT1YLL015W 4680 nt3.16□□□□□ -1.9
MSH3P25336 GUP1YGL084C 1683 nt3.15□□□□□ -1.9
MSH3P25336 PTC5YOR090C 1719 nt3.15□□□□□ -1.91
MSH3P25336 TOM1YDR457W 9807 nt3.15□□□□□ -1.91
MSH3P25336 VIK1YPL253C 1944 nt3.15□□□□□ -1.91
MSH3P25336 YIL169CYIL169C 2988 nt3.15□□□□□ -1.91
MSH3P25336 YGR067CYGR067C 2415 nt3.14□□□□□ -1.91
MSH3P25336 ECM29YHL030W 5607 nt3.14□□□□□ -1.91
MSH3P25336 TRS65YGR166W 1683 nt3.14□□□□□ -1.91
MSH3P25336 tF(GAA)QtF(GAA)Q 75 nt3.14□□□□□ -1.91
MSH3P25336 PRE4YFR050C 801 nt3.14□□□□□ -1.91
MSH3P25336 DSE4YNR067C 3354 nt3.14□□□□□ -1.91
MSH3P25336 KSP1YHR082C 3090 nt3.13□□□□□ -1.91
MSH3P25336 VPS55YJR044C 423 nt3.13□□□□□ -1.91
MSH3P25336 APC9YLR102C 798 nt3.13□□□□□ -1.91
MSH3P25336 YNL170WYNL170W 396 nt3.13□□□□□ -1.91
MSH3P25336 UBP11YKR098C 2154 nt3.12□□□□□ -1.91
MSH3P25336 YME2YMR302C 2553 nt3.12□□□□□ -1.91
MSH3P25336 YEL014CYEL014C 306 nt3.12□□□□□ -1.91
MSH3P25336 YER088C-AYER088C-A 324 nt3.12□□□□□ -1.91
MSH3P25336 YJL150WYJL150W 303 nt3.12□□□□□ -1.91
MSH3P25336 YLR120W-AYLR120W-A 102 nt3.12□□□□□ -1.91
MSH3P25336 YML037CYML037C 1023 nt3.12□□□□□ -1.91
MSH3P25336 NUT2YPR168W 474 nt3.12□□□□□ -1.91
MSH3P25336 VMA9YCL005W-A 222 nt3.12□□□□□ -1.91
MSH3P25336 DNL4YOR005C 2835 nt3.12□□□□□ -1.91
MSH3P25336 YDR426CYDR426C 378 nt3.11□□□□□ -1.91
MSH3P25336 Q0143Q0143 153 nt3.11□□□□□ -1.91
MSH3P25336 TRX1YLR043C 312 nt3.11□□□□□ -1.91
MSH3P25336 YLR255CYLR255C 354 nt3.11□□□□□ -1.91
MSH3P25336 FPR1YNL135C 345 nt3.11□□□□□ -1.91
MSH3P25336 CSE2YNR010W 450 nt3.11□□□□□ -1.91
MSH3P25336 VPS35YJL154C 2835 nt3.11□□□□□ -1.91
MSH3P25336 YPR089WYPR089W 2667 nt3.11□□□□□ -1.91
MSH3P25336 LCD1YDR499W 2244 nt3.11□□□□□ -1.91
MSH3P25336 RPL23BYER117W 414 nt3.1□□□□□ -1.91
MSH3P25336 UPS1YLR193C 528 nt3.1□□□□□ -1.91
MSH3P25336 YMR321CYMR321C 318 nt3.1□□□□□ -1.91
MSH3P25336 RPL33AYPL143W 324 nt3.1□□□□□ -1.91
MSH3P25336 YBR224WYBR224W 516 nt3.1□□□□□ -1.91
MSH3P25336 TMN3YER113C 2121 nt3.1□□□□□ -1.91
MSH3P25336 YOR333CYOR333C 417 nt3.09□□□□□ -1.91
MSH3P25336 PFF1YBR074W 2931 nt3.08□□□□□ -1.92
MSH3P25336 PEX8YGR077C 1770 nt3.08□□□□□ -1.92
MSH3P25336 PRP39YML046W 1890 nt3.08□□□□□ -1.92
MSH3P25336 YLR012CYLR012C 300 nt3.08□□□□□ -1.92
MSH3P25336 SNC2YOR327C 348 nt3.08□□□□□ -1.92
MSH3P25336 BNR1YIL159W 4128 nt3.08□□□□□ -1.92
MSH3P25336 RGR1YLR071C 3249 nt3.07□□□□□ -1.92
MSH3P25336 OLI1Q0130 231 nt3.07□□□□□ -1.92
MSH3P25336 YMR194C-AYMR194C-A 225 nt3.07□□□□□ -1.92
MSH3P25336 MDM20YOL076W 2391 nt3.07□□□□□ -1.92
MSH3P25336 ESC1YMR219W 4977 nt3.06□□□□□ -1.92
MSH3P25336 EFR3YMR212C 2349 nt3.06□□□□□ -1.92
MSH3P25336 RPL20AYMR242C 519 nt3.06□□□□□ -1.92
MSH3P25336 SKP2YNL311C 2292 nt3.06□□□□□ -1.92
MSH3P25336 PRP6YBR055C 2700 nt3.06□□□□□ -1.92
MSH3P25336 YPR002C-AYPR002C-A 198 nt3.06□□□□□ -1.92
MSH3P25336 VPH1YOR270C 2523 nt3.05□□□□□ -1.92
MSH3P25336 RPS22AYJL190C 393 nt3.05□□□□□ -1.92
MSH3P25336 YLR140WYLR140W 327 nt3.05□□□□□ -1.92
MSH3P25336 RRT15YLR162W-A 189 nt3.05□□□□□ -1.92
MSH3P25336 YOR015WYOR015W 360 nt3.05□□□□□ -1.92
MSH3P25336 HRD3YLR207W 2502 nt3.04□□□□□ -1.92
MSH3P25336 RIF1YBR275C 5751 nt3.04□□□□□ -1.92
MSH3P25336 SIN3YOL004W 4611 nt3.04□□□□□ -1.92
MSH3P25336 CFT2YLR115W 2580 nt3.04□□□□□ -1.92
MSH3P25336 FMP16YDR070C 282 nt3.04□□□□□ -1.92
MSH3P25336 ERP6YGL002W 651 nt3.04□□□□□ -1.92
MSH3P25336 SMD1YGR074W 441 nt3.04□□□□□ -1.92
MSH3P25336 ECM21YBL101C 3354 nt3.04□□□□□ -1.92
MSH3P25336 PDE2YOR360C 1581 nt3.03□□□□□ -1.92
MSH3P25336 MMS1YPR164W 4224 nt3.02□□□□□ -1.93
MSH3P25336 CDC27YBL084C 2277 nt3.02□□□□□ -1.93
MSH3P25336 YIL174WYIL174W 228 nt3.02□□□□□ -1.93
MSH3P25336 MBB1YJL199C 327 nt3.02□□□□□ -1.93
MSH3P25336 YJL222W-AYJL222W-A 228 nt3.02□□□□□ -1.93
MSH3P25336 SEF1YBL066C 3447 nt3.01□□□□□ -1.93
MSH3P25336 NET1YJL076W 3570 nt3.01□□□□□ -1.93
MSH3P25336 AI5_ALPHAQ0070 1893 nt3.01□□□□□ -1.93
MSH3P25336 COS111YBR203W 2775 nt3□□□□□ -1.93
MSH3P25336 AXL1YPR122W 3627 nt3□□□□□ -1.93
MSH3P25336 SMY1YKL079W 1971 nt3□□□□□ -1.93
MSH3P25336 RRP12YPL012W 3687 nt3□□□□□ -1.93
MSH3P25336 SSS1YDR086C 243 nt3□□□□□ -1.93
MSH3P25336 YDR286CYDR286C 345 nt3□□□□□ -1.93
MSH3P25336 SDH6YDR379C-A 240 nt3□□□□□ -1.93
MSH3P25336 NOP10YHR072W-A 177 nt3□□□□□ -1.93
MSH3P25336 MSB2YGR014W 3921 nt3□□□□□ -1.93
MSH3P25336 NOP53YPL146C 1368 nt3□□□□□ -1.93
MSH3P25336 HSC82YMR186W 2118 nt2.99□□□□□ -1.93
MSH3P25336 KAP123YER110C 3342 nt2.99□□□□□ -1.93
MSH3P25336 HYP2YEL034W 474 nt2.99□□□□□ -1.93
MSH3P25336 YJL135WYJL135W 318 nt2.99□□□□□ -1.93
Retrieved 100 of 7,029 protein–RNA pairs in 40.1 ms