Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.13■□□□□ 0.33
COL8A2P25067 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.13■□□□□ 0.33
COL8A2P25067 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL8A2P25067 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
COL8A2P25067 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
COL8A2P25067 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL8A2P25067 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL8A2P25067 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL8A2P25067 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
COL8A2P25067 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.12■□□□□ 0.33
COL8A2P25067 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.12■□□□□ 0.33
COL8A2P25067 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
COL8A2P25067 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL8A2P25067 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL8A2P25067 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.12■□□□□ 0.33
COL8A2P25067 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL8A2P25067 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL8A2P25067 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.12■□□□□ 0.33
COL8A2P25067 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.12■□□□□ 0.33
COL8A2P25067 MIR2861-201ENST00000636310 90 ntBASIC17.12■□□□□ 0.33
COL8A2P25067 AC073648.6-201ENST00000641589 218 ntBASIC17.12■□□□□ 0.33
COL8A2P25067 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
COL8A2P25067 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC17.12■□□□□ 0.33
COL8A2P25067 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.12■□□□□ 0.33
COL8A2P25067 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL8A2P25067 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL8A2P25067 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL8A2P25067 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL8A2P25067 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
COL8A2P25067 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL8A2P25067 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
COL8A2P25067 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL8A2P25067 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
COL8A2P25067 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
COL8A2P25067 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL8A2P25067 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL8A2P25067 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL8A2P25067 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
COL8A2P25067 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COL8A2P25067 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL8A2P25067 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL8A2P25067 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL8A2P25067 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COL8A2P25067 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.11■□□□□ 0.33
COL8A2P25067 AC098590.1-201ENST00000468126 897 ntBASIC17.11■□□□□ 0.33
COL8A2P25067 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL8A2P25067 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL8A2P25067 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.11■□□□□ 0.33
COL8A2P25067 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.11■□□□□ 0.33
COL8A2P25067 SOX15-203ENST00000570788 1093 ntBASIC17.11■□□□□ 0.33
COL8A2P25067 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.11■□□□□ 0.33
COL8A2P25067 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.11■□□□□ 0.33
COL8A2P25067 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL8A2P25067 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
COL8A2P25067 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL8A2P25067 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.11■□□□□ 0.33
COL8A2P25067 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
COL8A2P25067 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL8A2P25067 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL8A2P25067 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL8A2P25067 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.11■□□□□ 0.33
COL8A2P25067 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.11■□□□□ 0.33
COL8A2P25067 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
COL8A2P25067 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COL8A2P25067 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
COL8A2P25067 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COL8A2P25067 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL8A2P25067 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL8A2P25067 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL8A2P25067 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COL8A2P25067 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COL8A2P25067 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COL8A2P25067 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COL8A2P25067 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
COL8A2P25067 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL8A2P25067 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL8A2P25067 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.1■□□□□ 0.33
COL8A2P25067 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COL8A2P25067 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL8A2P25067 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL8A2P25067 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COL8A2P25067 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL8A2P25067 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.1■□□□□ 0.33
COL8A2P25067 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.1■□□□□ 0.33
COL8A2P25067 RPS2P52-201ENST00000469610 820 ntBASIC17.1■□□□□ 0.33
COL8A2P25067 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.1■□□□□ 0.33
COL8A2P25067 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL8A2P25067 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.1■□□□□ 0.33
COL8A2P25067 AC142381.4-202ENST00000563973 229 ntBASIC17.1■□□□□ 0.33
COL8A2P25067 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL8A2P25067 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL8A2P25067 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COL8A2P25067 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL8A2P25067 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL8A2P25067 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
COL8A2P25067 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
COL8A2P25067 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COL8A2P25067 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL8A2P25067 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL8A2P25067 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms