Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 RARRES2P4-201ENST00000514074 484 ntBASIC20.32■□□□□ 0.84
VCLP18206 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
VCLP18206 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
VCLP18206 AC121338.2-201ENST00000622535 1744 ntBASIC20.32■□□□□ 0.84
VCLP18206 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VCLP18206 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
VCLP18206 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
VCLP18206 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.32■□□□□ 0.84
VCLP18206 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
VCLP18206 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VCLP18206 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
VCLP18206 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VCLP18206 AC116050.2-201ENST00000612102 1779 ntBASIC20.31■□□□□ 0.84
VCLP18206 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
VCLP18206 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
VCLP18206 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
VCLP18206 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.31■□□□□ 0.84
VCLP18206 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.31■□□□□ 0.84
VCLP18206 AL512625.2-201ENST00000417533 625 ntBASIC20.31■□□□□ 0.84
VCLP18206 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VCLP18206 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.31■□□□□ 0.84
VCLP18206 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
VCLP18206 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.31■□□□□ 0.84
VCLP18206 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.31■□□□□ 0.84
VCLP18206 PLK5-205ENST00000642079 1969 ntBASIC20.31■□□□□ 0.84
VCLP18206 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
VCLP18206 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
VCLP18206 AC006128.1-201ENST00000624704 1661 ntBASIC20.31■□□□□ 0.84
VCLP18206 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
VCLP18206 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.31■□□□□ 0.84
VCLP18206 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
VCLP18206 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
VCLP18206 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VCLP18206 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.3■□□□□ 0.84
VCLP18206 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
VCLP18206 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.3■□□□□ 0.84
VCLP18206 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VCLP18206 AC104771.1-201ENST00000603335 964 ntBASIC20.3■□□□□ 0.84
VCLP18206 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.3■□□□□ 0.84
VCLP18206 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.3■□□□□ 0.84
VCLP18206 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VCLP18206 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.3■□□□□ 0.84
VCLP18206 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VCLP18206 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
VCLP18206 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VCLP18206 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VCLP18206 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VCLP18206 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VCLP18206 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VCLP18206 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
VCLP18206 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VCLP18206 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VCLP18206 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
VCLP18206 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.29■□□□□ 0.84
VCLP18206 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VCLP18206 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VCLP18206 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
VCLP18206 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VCLP18206 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.29■□□□□ 0.84
VCLP18206 AC016405.3-201ENST00000607710 860 ntBASIC20.29■□□□□ 0.84
VCLP18206 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.29■□□□□ 0.84
VCLP18206 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
VCLP18206 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.29■□□□□ 0.84
VCLP18206 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
VCLP18206 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
VCLP18206 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
VCLP18206 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
VCLP18206 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.29■□□□□ 0.84
VCLP18206 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VCLP18206 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.29■□□□□ 0.84
VCLP18206 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VCLP18206 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VCLP18206 MKRN4P-201ENST00000444706 1521 ntBASIC20.28■□□□□ 0.84
VCLP18206 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
VCLP18206 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VCLP18206 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
VCLP18206 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VCLP18206 TSPY6P-201ENST00000448518 926 ntBASIC20.28■□□□□ 0.84
VCLP18206 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
VCLP18206 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VCLP18206 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.28■□□□□ 0.84
VCLP18206 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.28■□□□□ 0.84
VCLP18206 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
VCLP18206 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.28■□□□□ 0.84
VCLP18206 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
VCLP18206 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
VCLP18206 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
VCLP18206 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
VCLP18206 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VCLP18206 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
VCLP18206 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.27■□□□□ 0.84
VCLP18206 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VCLP18206 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VCLP18206 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.27■□□□□ 0.84
VCLP18206 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.27■□□□□ 0.84
VCLP18206 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.27■□□□□ 0.84
VCLP18206 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.27■□□□□ 0.84
VCLP18206 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.27■□□□□ 0.84
VCLP18206 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
VCLP18206 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms