Protein–RNA interactions for Protein: P15884

TCF4, Transcription factor 4, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4P15884 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TCF4P15884 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TCF4P15884 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.16■□□□□ 0.98
TCF4P15884 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
TCF4P15884 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TCF4P15884 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TCF4P15884 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TCF4P15884 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TCF4P15884 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TCF4P15884 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.16■□□□□ 0.98
TCF4P15884 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.16■□□□□ 0.98
TCF4P15884 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
TCF4P15884 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.16■□□□□ 0.98
TCF4P15884 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.16■□□□□ 0.98
TCF4P15884 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.16■□□□□ 0.98
TCF4P15884 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TCF4P15884 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.16■□□□□ 0.98
TCF4P15884 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TCF4P15884 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TCF4P15884 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TCF4P15884 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TCF4P15884 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TCF4P15884 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TCF4P15884 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TCF4P15884 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TCF4P15884 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
TCF4P15884 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.15■□□□□ 0.98
TCF4P15884 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TCF4P15884 AL356652.1-201ENST00000615962 565 ntBASIC21.15■□□□□ 0.98
TCF4P15884 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TCF4P15884 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
TCF4P15884 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.15■□□□□ 0.98
TCF4P15884 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
TCF4P15884 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TCF4P15884 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
TCF4P15884 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
TCF4P15884 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TCF4P15884 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.14■□□□□ 0.98
TCF4P15884 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TCF4P15884 TCF3P1-201ENST00000423021 1937 ntBASIC21.14■□□□□ 0.98
TCF4P15884 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TCF4P15884 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TCF4P15884 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.14■□□□□ 0.97
TCF4P15884 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TCF4P15884 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.14■□□□□ 0.97
TCF4P15884 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TCF4P15884 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TCF4P15884 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TCF4P15884 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TCF4P15884 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.14■□□□□ 0.97
TCF4P15884 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
TCF4P15884 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.14■□□□□ 0.97
TCF4P15884 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
TCF4P15884 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TCF4P15884 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TCF4P15884 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.13■□□□□ 0.97
TCF4P15884 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TCF4P15884 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TCF4P15884 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TCF4P15884 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TCF4P15884 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
TCF4P15884 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
TCF4P15884 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
TCF4P15884 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.13■□□□□ 0.97
TCF4P15884 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.13■□□□□ 0.97
TCF4P15884 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.13■□□□□ 0.97
TCF4P15884 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.13■□□□□ 0.97
TCF4P15884 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.13■□□□□ 0.97
TCF4P15884 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TCF4P15884 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.13■□□□□ 0.97
TCF4P15884 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.13■□□□□ 0.97
TCF4P15884 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.13■□□□□ 0.97
TCF4P15884 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TCF4P15884 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TCF4P15884 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TCF4P15884 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.13■□□□□ 0.97
TCF4P15884 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.12■□□□□ 0.97
TCF4P15884 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.12■□□□□ 0.97
TCF4P15884 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TCF4P15884 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.12■□□□□ 0.97
TCF4P15884 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
TCF4P15884 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.12■□□□□ 0.97
TCF4P15884 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
TCF4P15884 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.12■□□□□ 0.97
TCF4P15884 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
TCF4P15884 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TCF4P15884 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.12■□□□□ 0.97
TCF4P15884 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TCF4P15884 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TCF4P15884 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.12■□□□□ 0.97
TCF4P15884 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TCF4P15884 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TCF4P15884 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TCF4P15884 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TCF4P15884 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TCF4P15884 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TCF4P15884 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TCF4P15884 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TCF4P15884 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TCF4P15884 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms