Protein–RNA interactions for Protein: P0DMR1

HNRNPCL4, Heterogeneous nuclear ribonucleoprotein C-like 4, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPCL4P0DMR1 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HNRNPCL4P0DMR1 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.81■□□□□ 0.6
HNRNPCL4P0DMR1 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
HNRNPCL4P0DMR1 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.8■□□□□ 0.6
HNRNPCL4P0DMR1 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.8■□□□□ 0.6
HNRNPCL4P0DMR1 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.8■□□□□ 0.6
HNRNPCL4P0DMR1 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.8■□□□□ 0.6
HNRNPCL4P0DMR1 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HNRNPCL4P0DMR1 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.8■□□□□ 0.6
HNRNPCL4P0DMR1 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.8■□□□□ 0.6
HNRNPCL4P0DMR1 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.8■□□□□ 0.6
HNRNPCL4P0DMR1 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.8■□□□□ 0.6
HNRNPCL4P0DMR1 AL591742.1-201ENST00000604433 565 ntBASIC18.8■□□□□ 0.6
HNRNPCL4P0DMR1 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
HNRNPCL4P0DMR1 AC010536.3-201ENST00000620306 533 ntBASIC18.8■□□□□ 0.6
HNRNPCL4P0DMR1 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
HNRNPCL4P0DMR1 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HNRNPCL4P0DMR1 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HNRNPCL4P0DMR1 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HNRNPCL4P0DMR1 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
HNRNPCL4P0DMR1 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HNRNPCL4P0DMR1 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HNRNPCL4P0DMR1 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HNRNPCL4P0DMR1 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
HNRNPCL4P0DMR1 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
HNRNPCL4P0DMR1 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HNRNPCL4P0DMR1 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
HNRNPCL4P0DMR1 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HNRNPCL4P0DMR1 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HNRNPCL4P0DMR1 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HNRNPCL4P0DMR1 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.79■□□□□ 0.6
HNRNPCL4P0DMR1 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
HNRNPCL4P0DMR1 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HNRNPCL4P0DMR1 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HNRNPCL4P0DMR1 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
HNRNPCL4P0DMR1 TCF3P1-201ENST00000423021 1937 ntBASIC18.79■□□□□ 0.6
HNRNPCL4P0DMR1 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HNRNPCL4P0DMR1 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HNRNPCL4P0DMR1 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.79■□□□□ 0.6
HNRNPCL4P0DMR1 KRT18P11-201ENST00000435214 1283 ntBASIC18.79■□□□□ 0.6
HNRNPCL4P0DMR1 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.79■□□□□ 0.6
HNRNPCL4P0DMR1 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.79■□□□□ 0.6
HNRNPCL4P0DMR1 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.79■□□□□ 0.6
HNRNPCL4P0DMR1 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HNRNPCL4P0DMR1 MIR6821-201ENST00000617625 74 ntBASIC18.79■□□□□ 0.6
HNRNPCL4P0DMR1 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HNRNPCL4P0DMR1 PCDHAC2-203ENST00000615316 3011 ntBASIC18.79■□□□□ 0.6
HNRNPCL4P0DMR1 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HNRNPCL4P0DMR1 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
HNRNPCL4P0DMR1 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.79■□□□□ 0.6
HNRNPCL4P0DMR1 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HNRNPCL4P0DMR1 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HNRNPCL4P0DMR1 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
HNRNPCL4P0DMR1 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HNRNPCL4P0DMR1 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HNRNPCL4P0DMR1 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
HNRNPCL4P0DMR1 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HNRNPCL4P0DMR1 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HNRNPCL4P0DMR1 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
HNRNPCL4P0DMR1 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
HNRNPCL4P0DMR1 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HNRNPCL4P0DMR1 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
HNRNPCL4P0DMR1 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HNRNPCL4P0DMR1 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HNRNPCL4P0DMR1 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HNRNPCL4P0DMR1 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HNRNPCL4P0DMR1 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HNRNPCL4P0DMR1 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
HNRNPCL4P0DMR1 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.78■□□□□ 0.6
HNRNPCL4P0DMR1 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.78■□□□□ 0.6
HNRNPCL4P0DMR1 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.78■□□□□ 0.6
HNRNPCL4P0DMR1 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
HNRNPCL4P0DMR1 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
HNRNPCL4P0DMR1 DPP3P2-201ENST00000416030 1696 ntBASIC18.78■□□□□ 0.6
HNRNPCL4P0DMR1 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
HNRNPCL4P0DMR1 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.78■□□□□ 0.6
HNRNPCL4P0DMR1 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HNRNPCL4P0DMR1 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
HNRNPCL4P0DMR1 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.78■□□□□ 0.6
HNRNPCL4P0DMR1 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
HNRNPCL4P0DMR1 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HNRNPCL4P0DMR1 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.77■□□□□ 0.6
HNRNPCL4P0DMR1 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HNRNPCL4P0DMR1 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HNRNPCL4P0DMR1 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HNRNPCL4P0DMR1 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HNRNPCL4P0DMR1 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HNRNPCL4P0DMR1 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
HNRNPCL4P0DMR1 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HNRNPCL4P0DMR1 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.77■□□□□ 0.6
HNRNPCL4P0DMR1 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.77■□□□□ 0.6
HNRNPCL4P0DMR1 AL162412.1-201ENST00000567129 965 ntBASIC18.77■□□□□ 0.6
HNRNPCL4P0DMR1 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HNRNPCL4P0DMR1 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HNRNPCL4P0DMR1 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HNRNPCL4P0DMR1 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
HNRNPCL4P0DMR1 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
HNRNPCL4P0DMR1 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HNRNPCL4P0DMR1 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
HNRNPCL4P0DMR1 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.77■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms