Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
HOXC6P09630 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC23.04■■□□□ 1.28
HOXC6P09630 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC23.04■■□□□ 1.28
HOXC6P09630 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC23.04■■□□□ 1.28
HOXC6P09630 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
HOXC6P09630 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
HOXC6P09630 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
HOXC6P09630 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
HOXC6P09630 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
HOXC6P09630 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
HOXC6P09630 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
HOXC6P09630 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
HOXC6P09630 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
HOXC6P09630 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
HOXC6P09630 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC23.03■■□□□ 1.28
HOXC6P09630 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
HOXC6P09630 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC23.03■■□□□ 1.28
HOXC6P09630 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
HOXC6P09630 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC23.03■■□□□ 1.28
HOXC6P09630 CD177P1-201ENST00000606252 935 ntBASIC23.03■■□□□ 1.28
HOXC6P09630 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
HOXC6P09630 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC23.03■■□□□ 1.28
HOXC6P09630 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
HOXC6P09630 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC23.03■■□□□ 1.28
HOXC6P09630 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
HOXC6P09630 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
HOXC6P09630 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
HOXC6P09630 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
HOXC6P09630 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
HOXC6P09630 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
HOXC6P09630 AL353807.1-201ENST00000427475 662 ntBASIC23.02■■□□□ 1.28
HOXC6P09630 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC23.02■■□□□ 1.28
HOXC6P09630 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC23.02■■□□□ 1.28
HOXC6P09630 HTR7P1-201ENST00000538670 1336 ntBASIC23.02■■□□□ 1.28
HOXC6P09630 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
HOXC6P09630 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
HOXC6P09630 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
HOXC6P09630 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
HOXC6P09630 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
HOXC6P09630 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC23.01■■□□□ 1.27
HOXC6P09630 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC23.01■■□□□ 1.27
HOXC6P09630 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
HOXC6P09630 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC23.01■■□□□ 1.27
HOXC6P09630 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
HOXC6P09630 CBFB-203ENST00000561924 584 ntTSL 5 BASIC23.01■■□□□ 1.27
HOXC6P09630 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
HOXC6P09630 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
HOXC6P09630 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
HOXC6P09630 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC23.01■■□□□ 1.27
HOXC6P09630 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
HOXC6P09630 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
HOXC6P09630 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
HOXC6P09630 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
HOXC6P09630 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
HOXC6P09630 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
HOXC6P09630 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
HOXC6P09630 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
HOXC6P09630 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
HOXC6P09630 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
HOXC6P09630 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
HOXC6P09630 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
HOXC6P09630 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
HOXC6P09630 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
HOXC6P09630 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
HOXC6P09630 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
HOXC6P09630 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
HOXC6P09630 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC23■■□□□ 1.27
HOXC6P09630 MMP23A-201ENST00000234610 1017 ntBASIC23■■□□□ 1.27
HOXC6P09630 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
HOXC6P09630 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC23■■□□□ 1.27
HOXC6P09630 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
HOXC6P09630 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC23■■□□□ 1.27
HOXC6P09630 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC23■■□□□ 1.27
HOXC6P09630 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC23■■□□□ 1.27
HOXC6P09630 RPS15-203ENST00000586096 570 ntTSL 2 BASIC23■■□□□ 1.27
HOXC6P09630 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
HOXC6P09630 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC23■■□□□ 1.27
HOXC6P09630 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
HOXC6P09630 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
HOXC6P09630 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC23■■□□□ 1.27
HOXC6P09630 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
HOXC6P09630 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
HOXC6P09630 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
HOXC6P09630 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
HOXC6P09630 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC22.99■■□□□ 1.27
HOXC6P09630 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
HOXC6P09630 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
HOXC6P09630 AL355355.2-201ENST00000442321 338 ntBASIC22.99■■□□□ 1.27
HOXC6P09630 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC22.99■■□□□ 1.27
HOXC6P09630 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC22.99■■□□□ 1.27
HOXC6P09630 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
HOXC6P09630 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC22.99■■□□□ 1.27
HOXC6P09630 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
HOXC6P09630 MYB-221ENST00000527615 2381 ntTSL 5 BASIC22.99■■□□□ 1.27
HOXC6P09630 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC22.99■■□□□ 1.27
HOXC6P09630 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
HOXC6P09630 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC22.99■■□□□ 1.27
HOXC6P09630 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC22.98■■□□□ 1.27
HOXC6P09630 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
HOXC6P09630 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC22.98■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms