Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.03■□□□□ 0.96
CD48P09326 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CD48P09326 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CD48P09326 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
CD48P09326 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.03■□□□□ 0.96
CD48P09326 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.03■□□□□ 0.96
CD48P09326 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
CD48P09326 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.03■□□□□ 0.96
CD48P09326 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CD48P09326 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.03■□□□□ 0.96
CD48P09326 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
CD48P09326 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CD48P09326 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CD48P09326 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CD48P09326 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CD48P09326 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
CD48P09326 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CD48P09326 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CD48P09326 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CD48P09326 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CD48P09326 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CD48P09326 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.02■□□□□ 0.96
CD48P09326 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.02■□□□□ 0.96
CD48P09326 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CD48P09326 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.02■□□□□ 0.96
CD48P09326 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CD48P09326 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CD48P09326 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CD48P09326 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CD48P09326 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CD48P09326 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CD48P09326 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
CD48P09326 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
CD48P09326 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CD48P09326 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.01■□□□□ 0.95
CD48P09326 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CD48P09326 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CD48P09326 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CD48P09326 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CD48P09326 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CD48P09326 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CD48P09326 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CD48P09326 AC007322.1-201ENST00000426983 750 ntBASIC21.01■□□□□ 0.95
CD48P09326 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.01■□□□□ 0.95
CD48P09326 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.01■□□□□ 0.95
CD48P09326 AC231657.2-201ENST00000624556 255 ntBASIC21.01■□□□□ 0.95
CD48P09326 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CD48P09326 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
CD48P09326 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CD48P09326 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.01■□□□□ 0.95
CD48P09326 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21■□□□□ 0.95
CD48P09326 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CD48P09326 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CD48P09326 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21■□□□□ 0.95
CD48P09326 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CD48P09326 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21■□□□□ 0.95
CD48P09326 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21■□□□□ 0.95
CD48P09326 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CD48P09326 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CD48P09326 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CD48P09326 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CD48P09326 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21■□□□□ 0.95
CD48P09326 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21■□□□□ 0.95
CD48P09326 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CD48P09326 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21■□□□□ 0.95
CD48P09326 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21■□□□□ 0.95
CD48P09326 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CD48P09326 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21■□□□□ 0.95
CD48P09326 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21■□□□□ 0.95
CD48P09326 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CD48P09326 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21■□□□□ 0.95
CD48P09326 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21■□□□□ 0.95
CD48P09326 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21■□□□□ 0.95
CD48P09326 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CD48P09326 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CD48P09326 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21■□□□□ 0.95
CD48P09326 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21■□□□□ 0.95
CD48P09326 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CD48P09326 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.99■□□□□ 0.95
CD48P09326 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.99■□□□□ 0.95
CD48P09326 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CD48P09326 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CD48P09326 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.99■□□□□ 0.95
CD48P09326 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CD48P09326 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.99■□□□□ 0.95
CD48P09326 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CD48P09326 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.99■□□□□ 0.95
CD48P09326 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CD48P09326 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
CD48P09326 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.99■□□□□ 0.95
CD48P09326 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.99■□□□□ 0.95
CD48P09326 AC080038.1-201ENST00000611274 1154 ntBASIC20.99■□□□□ 0.95
CD48P09326 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CD48P09326 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CD48P09326 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CD48P09326 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CD48P09326 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
CD48P09326 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CD48P09326 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CD48P09326 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms