Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MRPL3P09001 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
MRPL3P09001 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.15■□□□□ 0.5
MRPL3P09001 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MRPL3P09001 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MRPL3P09001 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
MRPL3P09001 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
MRPL3P09001 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
MRPL3P09001 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
MRPL3P09001 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.14■□□□□ 0.49
MRPL3P09001 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
MRPL3P09001 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
MRPL3P09001 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.14■□□□□ 0.49
MRPL3P09001 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MRPL3P09001 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MRPL3P09001 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MRPL3P09001 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
MRPL3P09001 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
MRPL3P09001 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.14■□□□□ 0.49
MRPL3P09001 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.14■□□□□ 0.49
MRPL3P09001 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.14■□□□□ 0.49
MRPL3P09001 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MRPL3P09001 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
MRPL3P09001 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.14■□□□□ 0.49
MRPL3P09001 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MRPL3P09001 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
MRPL3P09001 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.14■□□□□ 0.49
MRPL3P09001 AC116050.2-201ENST00000612102 1779 ntBASIC18.14■□□□□ 0.49
MRPL3P09001 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MRPL3P09001 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
MRPL3P09001 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MRPL3P09001 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
MRPL3P09001 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
MRPL3P09001 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MRPL3P09001 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.13■□□□□ 0.49
MRPL3P09001 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MRPL3P09001 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
MRPL3P09001 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.13■□□□□ 0.49
MRPL3P09001 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MRPL3P09001 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.13■□□□□ 0.49
MRPL3P09001 SUDS3P1-201ENST00000505831 966 ntBASIC18.13■□□□□ 0.49
MRPL3P09001 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MRPL3P09001 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MRPL3P09001 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MRPL3P09001 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.13■□□□□ 0.49
MRPL3P09001 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MRPL3P09001 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
MRPL3P09001 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MRPL3P09001 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.13■□□□□ 0.49
MRPL3P09001 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
MRPL3P09001 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.13■□□□□ 0.49
MRPL3P09001 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
MRPL3P09001 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.13■□□□□ 0.49
MRPL3P09001 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MRPL3P09001 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MRPL3P09001 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
MRPL3P09001 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
MRPL3P09001 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MRPL3P09001 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MRPL3P09001 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.12■□□□□ 0.49
MRPL3P09001 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MRPL3P09001 AC010141.2-201ENST00000452426 721 ntBASIC18.12■□□□□ 0.49
MRPL3P09001 SLC7A5P2-201ENST00000553010 536 ntBASIC18.12■□□□□ 0.49
MRPL3P09001 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
MRPL3P09001 AL158211.5-201ENST00000623583 2518 ntBASIC18.12■□□□□ 0.49
MRPL3P09001 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MRPL3P09001 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.12■□□□□ 0.49
MRPL3P09001 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
MRPL3P09001 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.12■□□□□ 0.49
MRPL3P09001 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
MRPL3P09001 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.11■□□□□ 0.49
MRPL3P09001 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.11■□□□□ 0.49
MRPL3P09001 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
MRPL3P09001 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MRPL3P09001 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
MRPL3P09001 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.11■□□□□ 0.49
MRPL3P09001 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MRPL3P09001 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MRPL3P09001 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MRPL3P09001 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
MRPL3P09001 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
MRPL3P09001 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
MRPL3P09001 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
MRPL3P09001 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
MRPL3P09001 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MRPL3P09001 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MRPL3P09001 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MRPL3P09001 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.11■□□□□ 0.49
MRPL3P09001 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.11■□□□□ 0.49
MRPL3P09001 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.11■□□□□ 0.49
MRPL3P09001 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MRPL3P09001 AC116562.4-201ENST00000641316 2276 ntBASIC18.11■□□□□ 0.49
MRPL3P09001 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
MRPL3P09001 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
MRPL3P09001 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
MRPL3P09001 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
MRPL3P09001 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MRPL3P09001 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MRPL3P09001 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
MRPL3P09001 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms