Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 BX119927.1-201ENST00000636596 1552 ntBASIC17.02■□□□□ 0.32
CD74P04233 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CD74P04233 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.02■□□□□ 0.32
CD74P04233 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CD74P04233 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CD74P04233 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CD74P04233 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.02■□□□□ 0.32
CD74P04233 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CD74P04233 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CD74P04233 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CD74P04233 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CD74P04233 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
CD74P04233 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CD74P04233 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
CD74P04233 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.02■□□□□ 0.31
CD74P04233 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.02■□□□□ 0.31
CD74P04233 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CD74P04233 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CD74P04233 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
CD74P04233 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CD74P04233 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD74P04233 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD74P04233 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CD74P04233 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.01■□□□□ 0.31
CD74P04233 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CD74P04233 AC093503.3-201ENST00000624917 2352 ntBASIC17.01■□□□□ 0.31
CD74P04233 LETM1P2-201ENST00000597330 2178 ntBASIC17.01■□□□□ 0.31
CD74P04233 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.01■□□□□ 0.31
CD74P04233 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD74P04233 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD74P04233 IGHV3-19-201ENST00000521488 291 ntBASIC17.01■□□□□ 0.31
CD74P04233 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD74P04233 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD74P04233 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CD74P04233 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CD74P04233 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD74P04233 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD74P04233 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CD74P04233 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.01■□□□□ 0.31
CD74P04233 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CD74P04233 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD74P04233 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CD74P04233 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD74P04233 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
CD74P04233 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17■□□□□ 0.31
CD74P04233 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CD74P04233 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CD74P04233 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17■□□□□ 0.31
CD74P04233 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CD74P04233 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CD74P04233 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CD74P04233 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC17■□□□□ 0.31
CD74P04233 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CD74P04233 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CD74P04233 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CD74P04233 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17■□□□□ 0.31
CD74P04233 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC17■□□□□ 0.31
CD74P04233 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC17■□□□□ 0.31
CD74P04233 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17■□□□□ 0.31
CD74P04233 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17■□□□□ 0.31
CD74P04233 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CD74P04233 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17■□□□□ 0.31
CD74P04233 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17■□□□□ 0.31
CD74P04233 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CD74P04233 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CD74P04233 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CD74P04233 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17■□□□□ 0.31
CD74P04233 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
CD74P04233 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CD74P04233 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC16.99■□□□□ 0.31
CD74P04233 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CD74P04233 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.99■□□□□ 0.31
CD74P04233 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CD74P04233 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CD74P04233 PTMA-205ENST00000410064 814 ntTSL 2 BASIC16.99■□□□□ 0.31
CD74P04233 POU5F1P4-201ENST00000413175 1085 ntBASIC16.99■□□□□ 0.31
CD74P04233 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CD74P04233 CD37-204ENST00000535669 1674 ntTSL 2 BASIC16.99■□□□□ 0.31
CD74P04233 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CD74P04233 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CD74P04233 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.99■□□□□ 0.31
CD74P04233 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CD74P04233 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
CD74P04233 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CD74P04233 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CD74P04233 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CD74P04233 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.99■□□□□ 0.31
CD74P04233 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CD74P04233 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CD74P04233 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
CD74P04233 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
CD74P04233 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CD74P04233 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CD74P04233 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD74P04233 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD74P04233 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.98■□□□□ 0.31
CD74P04233 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD74P04233 DPP3P2-201ENST00000416030 1696 ntBASIC16.98■□□□□ 0.31
CD74P04233 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC16.98■□□□□ 0.31
CD74P04233 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms