Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.08■□□□□ 0.65
MT-ND1P03886 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.08■□□□□ 0.65
MT-ND1P03886 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
MT-ND1P03886 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
MT-ND1P03886 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
MT-ND1P03886 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MT-ND1P03886 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.08■□□□□ 0.64
MT-ND1P03886 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
MT-ND1P03886 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
MT-ND1P03886 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MT-ND1P03886 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.08■□□□□ 0.64
MT-ND1P03886 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.08■□□□□ 0.64
MT-ND1P03886 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MT-ND1P03886 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
MT-ND1P03886 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MT-ND1P03886 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
MT-ND1P03886 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
MT-ND1P03886 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MT-ND1P03886 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MT-ND1P03886 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.07■□□□□ 0.64
MT-ND1P03886 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MT-ND1P03886 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.07■□□□□ 0.64
MT-ND1P03886 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.07■□□□□ 0.64
MT-ND1P03886 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MT-ND1P03886 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
MT-ND1P03886 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.07■□□□□ 0.64
MT-ND1P03886 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.07■□□□□ 0.64
MT-ND1P03886 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MT-ND1P03886 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
MT-ND1P03886 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
MT-ND1P03886 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MT-ND1P03886 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
MT-ND1P03886 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MT-ND1P03886 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
MT-ND1P03886 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
MT-ND1P03886 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
MT-ND1P03886 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
MT-ND1P03886 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
MT-ND1P03886 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.06■□□□□ 0.64
MT-ND1P03886 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
MT-ND1P03886 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MT-ND1P03886 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MT-ND1P03886 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
MT-ND1P03886 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.06■□□□□ 0.64
MT-ND1P03886 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.06■□□□□ 0.64
MT-ND1P03886 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MT-ND1P03886 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MT-ND1P03886 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MT-ND1P03886 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.06■□□□□ 0.64
MT-ND1P03886 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.06■□□□□ 0.64
MT-ND1P03886 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
MT-ND1P03886 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
MT-ND1P03886 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
MT-ND1P03886 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
MT-ND1P03886 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.06■□□□□ 0.64
MT-ND1P03886 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
MT-ND1P03886 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
MT-ND1P03886 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
MT-ND1P03886 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MT-ND1P03886 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
MT-ND1P03886 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.05■□□□□ 0.64
MT-ND1P03886 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MT-ND1P03886 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
MT-ND1P03886 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
MT-ND1P03886 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.05■□□□□ 0.64
MT-ND1P03886 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.05■□□□□ 0.64
MT-ND1P03886 SUDS3P1-201ENST00000505831 966 ntBASIC19.05■□□□□ 0.64
MT-ND1P03886 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.05■□□□□ 0.64
MT-ND1P03886 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.05■□□□□ 0.64
MT-ND1P03886 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.05■□□□□ 0.64
MT-ND1P03886 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MT-ND1P03886 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MT-ND1P03886 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
MT-ND1P03886 AC004408.2-201ENST00000623613 2777 ntBASIC19.05■□□□□ 0.64
MT-ND1P03886 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MT-ND1P03886 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MT-ND1P03886 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MT-ND1P03886 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MT-ND1P03886 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MT-ND1P03886 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
MT-ND1P03886 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MT-ND1P03886 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MT-ND1P03886 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MT-ND1P03886 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
MT-ND1P03886 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.04■□□□□ 0.64
MT-ND1P03886 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
MT-ND1P03886 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MT-ND1P03886 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MT-ND1P03886 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.04■□□□□ 0.64
MT-ND1P03886 AP004607.4-201ENST00000530158 1459 ntBASIC19.04■□□□□ 0.64
MT-ND1P03886 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MT-ND1P03886 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MT-ND1P03886 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
MT-ND1P03886 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MT-ND1P03886 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MT-ND1P03886 AC012414.1-201ENST00000556676 535 ntBASIC19.04■□□□□ 0.64
MT-ND1P03886 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.04■□□□□ 0.64
MT-ND1P03886 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.04■□□□□ 0.64
MT-ND1P03886 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
MT-ND1P03886 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms